Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00774 ATGCAAAGGTATCATGCTGGCAGCTGCACTAGTGCAGTGAATAATAGTGCAATTGGTGGACCATCTGCTAGGGACACAGGAAGATCTGATTCACCTTCTTTGCCTGCTAACTTCTCTGTAAGTTCAAGGCGACAACCACCGTTAAACTCATACAAGTTGAAGTGTGATAAAGAACCCTTGAACTCTAGGCTTGGCGCACCAGACTTTCATCCCCAAACATCAAATTGTCCTGAGGAGACCCTGACCAGAGAATATTTGCAATCTGGATACAGGGACACAGTTGAGGGACTTGAGGAAGCCAGAGAAATTTCTCTAACCCAGGTTCCGCATTTTAACAAGAATGTTGTTCTTAATTGCAAAGAGGCTATTAGAAAACGTCTGAGGGCCATTAATGAATCTCGTGCTCAGAAGAGGAAGGCTGGTCAAGTATATGGTGTAGCTCTTTCAGGATCACAACTTTCCAGGTCTGGAATTTTCCCTGAACTAAGACCTTGTGGTGAGGACTTCCAGAAAAAATGGATTGAGGGTTTATCTCAGCAGCACAAGCGATTACGCTCTTTAGCTGATCATGTTCCTCATGGTTATAAAAGGGCATCACTTTTAGATGTTCTTATAAGGAATAACGTTCCATTGCTTAGGGCCACCTGGTTTATCAAGGTTACTTACCTCAATCAGGTTCAACCTGGTTCTGTTGGTATTTCTTCTGGTACTGCTGACAAGATTCAACTGTCTCGCTCTGATGTTTGGACCAAAGATGTTATCAATTACTTGCAAGCCCTTCTGGATGAATTTTTGTCAAAGAATGTTTCCCATTCTGCTTCTCACGGTCGAGAGCGATCACCACAAATGCCTGGACCACTGCAGAACAAAAGTGATCCATTATCATCTGTTTCTGATGGTGAAGGACCATCCTTACATTTTAGATGGTGGTATATTGTACGGCTTCTGCAATGGCATCATGCTGAAGGGCTGCTTCATCCTTCTCTTGCCATTGATTGGGTGTTTAATCAACTACAGGAAAAAGATCTCCTTGAGGTTTGGCAGCTGTTATTGCCTATTATATATGGTTTTTTAGAAACTATTGTACTATCTCAAACTTATGTGCGTACCCTTGCTGGACTAGCTCTTCGTGTCATTCGTGATCCTGCTCCAGGTGGTTCAGATCTAGTAGATAATTCCAGGAGGGCATATACAACTTGTGCTGTGATTGAGATGCTTCGGTATTTAATACTTGTGGTGCCAGATACTTTTGTTGCTTTGGATTGCTTTCCTTTACCTTCCTCTGTTATTTCACATGCAATGAACGATGGCAATTTTGTATTAAAATCAACTGAAGCTGCAGGGAAGGTAAAAAATAGTTCAGATGATTTTGGTCACATTATTTCATGCATTCAGAAACATACAGAGGATCTTTCAAAGGCTTCAATCCCAGGGGCTCCAGGTCATTGTCTGGCTAAAGTGGCAAAAGCCTTGGATAAAGCTCTTGTTCTGGGTGATTTGCGTGTTGCATATAAATTTCTTTTTGAAGATCTTTCTGGTGGAACTGTATCTGAAGGCTGGGTTGCAAAAGTCAGCCCTTGCTTAAGGTTATCTTTGAAATGGTTTGGGACTGTGAGTACATCCCTTATATATTCTGTGTTTTTCCTTTGTGAGTGGGCAACATGTGATTTTAGGGATTTTCGTGGTACCCGTCCTCGTGACATTAAGTTTACTGGTAGGAAAGATCTCTCCCAGGTGCATATAGCAGTTAGGCTTTTAAAGATGAAGATTAGGGATGTGAAGATATCGCTAAAACAAACAAATGAATATCATGGAGCCAGTCGTTTTGCAAAGAATTCGAGTCAGCAGCCTAATTGGAATTATGTGGGCAAAGTATCCAGACTGAAATCTAGTTCAAAGAGTACAGGTTCTTCAGTTATATTTGAAAGCCCGGGACCTCTACATGATATTGTAGTTTGTTGGATTGATCAGCATGTAGTACATAAAGGGGAAGGTTCCAAGCGCATACAACTATTTATTGTGGAACTCATACGTGCTGGCATCTTTTACCCCTTGGCATATGTACGCCAGTTAATAGTCAGTGGGATCATGGATGCCAATGTAAATTTGGTTGATATGGAGCGACGGAGGAGACACTATCGCATCTTAAAGCAGCTACCTGGATGCTTTATCCATGATGTTTTGGAAGAATCAGGAATTGTTGAAGGGGTGCAGCTCAAAGGAGCCTTGCAAATTTACTTGAATGAACGTCACCTCATACTTCGGGGTCCTTTGAGCGAGTCCCATGATGATGCCAGTGGTTCCAATTTATCTGCTCTGAAGAGAAAAAAATATCATGCCTCGATGAAGGATGAAGCTTCTGGAATGGCAATTGATCAGAGAAATGTTATTTCTATCACAAAAAATGCAAAGGATAATGCTAACATTGAAGAACTAAGAACAGCTATTTCAGTACTGTTACATTTACCTAATTGTTCATCTAATTTGAGTGCTACAGGTTGTGATGAATCTGAAGGCAGTGTGAGAAGACCTATTCAGTACAGCAAAAATGATCCAGTAGAGGGTACACCTGGGTGTGAAGAATGTATCAGAACAAAGAGACAAAAGTTAAGTGAGGAAAGAAACTCATTCGTACAAGGGCATTCCCCAGTTCAATCTGATGATGATGATACATGGTGGTTGAAAAAGGGAATGAAATCCCCAGAGCCTCTCAAAGTTGATCAACCACAAAAGTCAACCAAGCTGGTCACCAAGAGTCGGCAGAAGAATGTGCGTAAAACTCAAAGTCTTGCTCAACTGGCAGCTTCTAGAATTGAGGGTAGCCAAGGGGCATCTACTAGTCATGTTTGTGGAAGTAAGGTAAGCTGCCCTCACCATAAAACTGCTATGGATGTAGATGGGCAGAGGTCTGTGGATAGCATCCGAACAAGTCATTTTGGAGATATAGTTTCCATTGGAAAAGCTCTAAAGCAGCTACGTTTTGTTGAGAAAAGGGCAATAGCCGTTTGGCTGCTGACTGTTGTTAGACAGGTAATTGAAGAGATGGATAAAAATGTTGGTAAAGTTGGTCAGTTTGGCAGGCCTTTTTCTGTTGCAGATGATAGAAGCTCAATACAGTGGAAACTGGGTGAGGATGAACTTTCTGCAATACTTTATTTGATGGATATATCCCATGATTTGGTATCAGCTGTCAAGTTCCTCCTTTGGTTGCTGCCGAGGGTTCTTAATAGCCCCAATTCTACAATTCATTCTGGGAGGAATGTGTTGATGCTTGCAAGGAATGTGGAAAACCAAGTTTGTGACGTGGGAGAGGCTTTTCTGCTTTCATCACTGAGAAGGTATGAGAACATTCTTGTTGCAGCAGACCTTATTCCAGAAGCCTTGTCATCTGCAACGCATCGAGCTGCCATGATTATTGCATCTAATGGAAGAGTTTCAGGGTCAGGAGCACTAGCTTTTGCTCGGTACTTGTTGAGAAAATACAGCAATGTGGCTAGTGTCATTGAGTGGGAGAAAACTTTTAAGGCTACATGTGACACTAGACTTTCCTCTGAACTTGACTCTTGTAGGTCAGTGGATGGAGAGTTAGGGCTGCCCCTAGGAGTTCCAGCCGGAGTAGAAGACCATGATGATTTTTTCCGTCAGAAGATCAGTGGTGGTCGGTTGCCATCCAGAGTAGGTGCAGGCATGAGGGAGGTAGTGCAGCGTAATGTTGAAGAAGCATTCCACTGTCTTTTTGGAAAGGACAGAAAGCTCTTTGCTGCTGGTACACTAAAAGGTCTTCCTCCTGTAGAGAAATGGGACAATGGATATCAAATTGCTCAACAAATAGTTATGGGTTTGATTGATTGCATAAGGCAGACTGGTGGTGCTGCTCAAGAAGGAGATCCCTCTTTGGTCTCTTCTGCGGTTTCTGCAATTGTTGGCAGTGTTGGTCCAACTTTAGCAAAAATGCCTGATTTTTCATCTGGCAACAATCATTCAAATACAACTTCAGCTTCAAATTTATTGAACTATGCCAGGTGCATTCTGCGAATGCATATAACCTGTTTAGGCCTGCTTAAGGAAGCCCTAGGAGAACGACAAAGCCGTGTATTTGATATTGCACTTGCTACTGAAGCTTCTACTGCTCTTGCTGGTGTTTTCACTCCTAGTAAAGCATCTCGTGCTCAGTTTCAAACATATCCTGAAGTCCATGAATCTAGTAACACTATTTCAAATGATATGGGAAACAACTCTAATAAAGTTGTGGTAGCAAAAACCACAAAAATTGCTGCTGCTGTTTCTGCACTTTTTGTTGGTGCAATTATATATGGTGTTACCAGCCTGGAAAGAATGGTAACAGTTCTCAGATTGAAGGAGGGTCTCGATGCAGTACAATTTGTAAGAAGCACGAGATCCAATTCGAATGGAAATGCACGTTCAGTTATGGCTTTTAAGATGGATAGTTCAATTGAAGTTCATGTCCATTGGTTTAGACTGCTTGTTGGAAACTGCCGAACAATCTGTGAAGGTTTAGTGGTGGAACTCTTGGGTGAACCATTTATTATGGCTCTTTCAAGGATGCAACGTATGCTCCCTTTAAATTTGGTCTTTCCACCAGCCTATTCAATATTTGCCTTTGTTAGGTGGCGGCCTTTCATTTTGAATGCTACAGTTCGTGAAGACATGAATCAAATTTATCAGTCTCTTGTAGTGGCCATAACTGAAGCAATAAAGCATTTGCCATTTCGAGATGTATGTTTTAGAGATTGTCAGGGTCTTTATGATCTTATGGCAGCAGATAATAGTGATTCTGAATTTGCAAGCCTGCTAGAGTTTAATGGTTCTGACATGCATTTAAAACTCGCAGCATTTCTTCCTCTACGCTCTAGGCTTTTCCTTAACGCCATTATTGATTGTAAGATGCCACAATCTATTTATGCAAAGGATGATGGGAGCCGAATTTCTGGACCTGGTGAGTCTAAAGTTAAACTCACAGATAGTGGGTCTAAGCTTCAGGATATGCTTGTGCATGTTTTGGATACATTGCAACCTGCCAAATTTCACTGGCAGTGGGTTGTCCTCAGGTTACTTTTAAATGAACAAGCCCTTATTGAAAAAGTGGAGAATCATGATGTGCCCTTGTCTGACGCTATAAAGTTGTCCTCACCTAGTCCTGAGAAGGCTGCTAGTGCTTCTGAGAATGAGAACAATTTTATTCAAATACTTCTCACAAGGTTACTGGTTAGACCTGATGCTGCACCCCTTTTTTCGGAGTTGATTCATCTCTTTGGTAGGTCACTCGAGGATTCAATGTTGTTGCAAGCTAAATGGTTCCTTGGAGGCCAGGATGTCCTCTTTGGTCGGAAGGCCATCAGACAAAGGCTGCATAACATTGCTGTGAATAAAAAACTTTCTGTGAAGACCCAATTTTGGGAACCTTGGGGTTGGTGTAGTCCATCTACTGATTTATCAACTATCAAGGGGGAGAACAAGAAGTTTGACAGCACCTCTCTTGAAGAAGGAGAAGTTGTTGAAGAGGGAACAGATTTGAAAAGGTGCCAGCAGCAAGTGATTGAGAGGGCTCTTATCGAGTTACTTCTTCCTTGCATAGATCAAAGCTCTGATGAAGCTCGCAATTCTTTTGCAACTGACTTGGTGAAACAGTTGAGTTTTATTGAGACACACATAACTGCTGTTACAGGTGGAAGTAAACCAGTGGGAAGTGCTCCTCCTGGAGTTGAAGGTCAGCCAAATAAAGTAAATAACCGCAAAAATATAAGAACTGGAAGCACTGCATTAGCTAGACGACCAACAGTGGCAGCAGATTCTTCTCCACCATCTCCTGCAGCCCTACGAGCTTCTATGTCATTACGGTTGCAGTTGCTCCTGAGATTTCTTCCTATTCTTTGCACTGACAGGGAGCCATCTGTGCGGAGCACGAGACAATTTCTTGCCTCTGTTATTTTTCGTCTCCTTGGTAGTCGGGTTGTTCATCAGGATGCAGGCATTTCAGCAAATGCTGTGCCTCTGCCGATGAGGGAGGCGGAGTCGTCTTCTGAAGTTGCTTCTGCTGCTTTTGTGGATTCTTCTTCTCAGAGTCTGTTTGATCGTTTGCTGTTGGTTTTGCATGGGTTGCTAAGTAGTTATCCTCCAAGCTGGCTCAGGCCAAAGCCTTCAAAGACAAGCAATGAACCTACAATTGATCGAGAATTGTTGGAGACTTTGCAGAATGACTTGGATCGTATGCAACTACCAGACACTGTTCGGTGGCGAATCCAAGCTGCAATGCCGATGCTCATCCCCTCTATGCGGTGCTCTCTATCCTGCCAGCCACCATCTGTTTCAAATTCTGCTCTTATGTGCATTCAACCTGGCTCTACAACTCCTGGGGTTAACTCCAGTAGTTCAACTATCCCCCAGAGGAATCCAGCTCTATCCAGGGTTGCATCTAATGCATCAGGAAAGCCAAAACGACAGGACAATGATTTGGAAATTGATCCTTGGACGCTTTTAGAAGATGGTGCTGGCTCTTTCCCTTTGCCAGGTAATACTGCTAGCATAGGAAGTGGTGATCATGTTAATATTCGAGCTGCAAGCTGGCTTAAAGGAGCTGTAAGGGTGAGACGGACAGACCTCACATATGTTGGTGCGGTGGATGACGATAGTTGA 6654 0.4267 MQRYHAGSCTSAVNNSAIGGPSARDTGRSDSPSLPANFSVSSRRQPPLNSYKLKCDKEPLNSRLGAPDFHPQTSNCPEETLTREYLQSGYRDTVEGLEEAREISLTQVPHFNKNVVLNCKEAIRKRLRAINESRAQKRKAGQVYGVALSGSQLSRSGIFPELRPCGEDFQKKWIEGLSQQHKRLRSLADHVPHGYKRASLLDVLIRNNVPLLRATWFIKVTYLNQVQPGSVGISSGTADKIQLSRSDVWTKDVINYLQALLDEFLSKNVSHSASHGRERSPQMPGPLQNKSDPLSSVSDGEGPSLHFRWWYIVRLLQWHHAEGLLHPSLAIDWVFNQLQEKDLLEVWQLLLPIIYGFLETIVLSQTYVRTLAGLALRVIRDPAPGGSDLVDNSRRAYTTCAVIEMLRYLILVVPDTFVALDCFPLPSSVISHAMNDGNFVLKSTEAAGKVKNSSDDFGHIISCIQKHTEDLSKASIPGAPGHCLAKVAKALDKALVLGDLRVAYKFLFEDLSGGTVSEGWVAKVSPCLRLSLKWFGTVSTSLIYSVFFLCEWATCDFRDFRGTRPRDIKFTGRKDLSQVHIAVRLLKMKIRDVKISLKQTNEYHGASRFAKNSSQQPNWNYVGKVSRLKSSSKSTGSSVIFESPGPLHDIVVCWIDQHVVHKGEGSKRIQLFIVELIRAGIFYPLAYVRQLIVSGIMDANVNLVDMERRRRHYRILKQLPGCFIHDVLEESGIVEGVQLKGALQIYLNERHLILRGPLSESHDDASGSNLSALKRKKYHASMKDEASGMAIDQRNVISITKNAKDNANIEELRTAISVLLHLPNCSSNLSATGCDESEGSVRRPIQYSKNDPVEGTPGCEECIRTKRQKLSEERNSFVQGHSPVQSDDDDTWWLKKGMKSPEPLKVDQPQKSTKLVTKSRQKNVRKTQSLAQLAASRIEGSQGASTSHVCGSKVSCPHHKTAMDVDGQRSVDSIRTSHFGDIVSIGKALKQLRFVEKRAIAVWLLTVVRQVIEEMDKNVGKVGQFGRPFSVADDRSSIQWKLGEDELSAILYLMDISHDLVSAVKFLLWLLPRVLNSPNSTIHSGRNVLMLARNVENQVCDVGEAFLLSSLRRYENILVAADLIPEALSSATHRAAMIIASNGRVSGSGALAFARYLLRKYSNVASVIEWEKTFKATCDTRLSSELDSCRSVDGELGLPLGVPAGVEDHDDFFRQKISGGRLPSRVGAGMREVVQRNVEEAFHCLFGKDRKLFAAGTLKGLPPVEKWDNGYQIAQQIVMGLIDCIRQTGGAAQEGDPSLVSSAVSAIVGSVGPTLAKMPDFSSGNNHSNTTSASNLLNYARCILRMHITCLGLLKEALGERQSRVFDIALATEASTALAGVFTPSKASRAQFQTYPEVHESSNTISNDMGNNSNKVVVAKTTKIAAAVSALFVGAIIYGVTSLERMVTVLRLKEGLDAVQFVRSTRSNSNGNARSVMAFKMDSSIEVHVHWFRLLVGNCRTICEGLVVELLGEPFIMALSRMQRMLPLNLVFPPAYSIFAFVRWRPFILNATVREDMNQIYQSLVVAITEAIKHLPFRDVCFRDCQGLYDLMAADNSDSEFASLLEFNGSDMHLKLAAFLPLRSRLFLNAIIDCKMPQSIYAKDDGSRISGPGESKVKLTDSGSKLQDMLVHVLDTLQPAKFHWQWVVLRLLLNEQALIEKVENHDVPLSDAIKLSSPSPEKAASASENENNFIQILLTRLLVRPDAAPLFSELIHLFGRSLEDSMLLQAKWFLGGQDVLFGRKAIRQRLHNIAVNKKLSVKTQFWEPWGWCSPSTDLSTIKGENKKFDSTSLEEGEVVEEGTDLKRCQQQVIERALIELLLPCIDQSSDEARNSFATDLVKQLSFIETHITAVTGGSKPVGSAPPGVEGQPNKVNNRKNIRTGSTALARRPTVAADSSPPSPAALRASMSLRLQLLLRFLPILCTDREPSVRSTRQFLASVIFRLLGSRVVHQDAGISANAVPLPMREAESSSEVASAAFVDSSSQSLFDRLLLVLHGLLSSYPPSWLRPKPSKTSNEPTIDRELLETLQNDLDRMQLPDTVRWRIQAAMPMLIPSMRCSLSCQPPSVSNSALMCIQPGSTTPGVNSSSSTIPQRNPALSRVASNASGKPKRQDNDLEIDPWTLLEDGAGSFPLPGNTASIGSGDHVNIRAASWLKGAVRVRRTDLTYVGAVDDDS 2217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00774 2217 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 1 2217 - -
Phco1g00774 2217 SMART Med12_2 158 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
Phco1g00774 2217 MobiDBLite consensus disorder prediction 906 922 - -
Phco1g00774 2217 MobiDBLite consensus disorder prediction 1 54 - -
Phco1g00774 2217 Pfam Transcription mediator complex subunit Med12 160 219 IPR019035 GO:0003712|GO:0006357|GO:0016592
Phco1g00774 2217 MobiDBLite consensus disorder prediction 2121 2159 - -
Phco1g00774 2217 MobiDBLite consensus disorder prediction 284 298 - -
Phco1g00774 2217 MobiDBLite consensus disorder prediction 899 922 - -
Phco1g00774 2217 MobiDBLite consensus disorder prediction 1 48 - -
Phco1g00774 2217 MobiDBLite consensus disorder prediction 1897 1919 - -
Phco1g00774 2217 MobiDBLite consensus disorder prediction 273 298 - -
Phco1g00774 2217 MobiDBLite consensus disorder prediction 2121 2151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00774 Phco-Chr1 7170823 7185928 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00774 1 7170823 7185928 Phco1g00774 1 7170823 7185928 ECH