Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00739 ATGTCCACCATGAAGAACAGTTTCAAAGACGCTGACCATTTATACTCTTCATGGAGCTTCTCAAAGCTAATGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTCAGATTCGTGAGCCACTCCTATGACTGTGATCAACCGCCCCACATTCCCACCATCACTCACCATCACATATCCAACACCCCACCTGAAGAAGAGTCCCCACCCTTTGAAGAAACGAGCCTTTCCCACATAGTCTTTGGCATAGGGGCCTCAGCCAAGCTTTGGAAGCAGAGAAAAGAGTACATCAAGATGTGGTGGAGGCCCAATGAGATGCGTGGAGTTGTGTGGTTAGAGCAGAAGGTGAAACCTGAACCTGGTGATGAGAATTCCTTGCCCTTGTTGAGGATCTCTGGTGACACTTCAAGGTTCAAGTATAAGAATCCAAAGGGGCATAGATCGGCTATTAGAATCTCACGCATAGTGTCTGAGACACTCAGGCTTGGAATGAAGGATGTGAGGTGGTTTGTGATGGGGGACGATGACACCGTTTTTGTGGCAGAAAATTTGGTGAAGGTTTTGCAGAAGTATGACCATAATCAGTTCTATTACATTGGGAGTTCTTCAGAGAGTCACTTGCAAAATATATACTTTTCTTATAATATGGCTTATGGGGGTGGTGGTTTTGCCATCAGTTATCCCTTGGCTGTGGCATTGGAGAAAATGCAAGATAGGTGCATTCAGAGGTACCCTGGGTTGTATGGCTCTGATGACAGAATTCAAGCTTGTATGGCAGAATTAGGAGTTCCACTCACCAAGGAGAAAGGGTTCCATCAGTTCGATGTGTACGGCAATCTCTTTGGGCTTCTGGCGGCCCATCCAGTTACGCCACTGGTGTCCCTACATCACTTGGACGTGGTTGAGCCCATATTTCCAAACGTGAGCCGGGTGCAGGCCTTGAAGCGCCTGAACGAGCCCATGAAGCTTGACCCAGCCGGGCTCATGCAGCAATCCATTTGCTACGACAAAGCCCGGAGCTGGACCGTATCCGTTTCATGGGGATACGCGGTTCAAATATTCCGGGGCATTTTCTCGGCCCGGGAAATGGAGATGCCGGCGAGGACGTTCCTCAACTGGTACAAACGGGCTGATTACACGGCGTACCCGTTCAACACCCGCCCCGTCAGCCGCCATGTTTGTCAGAAGCCTTTTGTCTATTTCTTGTCAGAGGCAATGTATGACGGTGCTGCCAATGAAACTTCCAGTCGTTATATACGGGTTCAGAAAAACCCCGATTGCAAGTGGAAGATGGAGGATCCGACCCGGATCAAATCGGTGGAAGTTCGTAAGAAAATCGACCAGCACTTGTGGGATAAGGCTCCAAGAAGAAATTGTTGTAGGGTTCGACGTACAAAGAAGAAAGGAACTCTGGTGATTGATGTGGGGGAATGCAGGGAGGATGAAGTTGTTGAGTTGTAG 1473 0.4861 MSTMKNSFKDADHLYSSWSFSKLMAFFFLLISISYLFYSLRFVSHSYDCDQPPHIPTITHHHISNTPPEEESPPFEETSLSHIVFGIGASAKLWKQRKEYIKMWWRPNEMRGVVWLEQKVKPEPGDENSLPLLRISGDTSRFKYKNPKGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVAENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVQALKRLNEPMKLDPAGLMQQSICYDKARSWTVSVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRHVCQKPFVYFLSEAMYDGAANETSSRYIRVQKNPDCKWKMEDPTRIKSVEVRKKIDQHLWDKAPRRNCCRVRRTKKKGTLVIDVGECREDEVVEL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00739 490 Gene3D - 70 324 - -
Phco1g00739 490 PANTHER FRINGE-RELATED 21 488 - -
Phco1g00739 490 FunFam Fringe-related protein-like 70 326 - -
Phco1g00739 490 Pfam Protein of unknown function, DUF604 212 464 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00739 Phco-Chr1 6759141 6761875 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00739 1 6759141 6761875 Phco1g00739 1 6759141 6761875 ECH
Phco3g02608 3 52734272 52737491 Phco1g00739 1 6759141 6761875 PCT