Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00713 ATGGTGGACGGCGGCGAATTCGCCGGCACCATTTGCTCGATCTGTTACGAGCCTCTCAACCCCATTACCGAGGACCTCCAATCGGTCTCCATCTGCGGCCACGTCTTTCACGAACTTTGTCTGCAGCAATGGTTCGAATACTGTTCGAAAGGGAAGAAACACACTTGCCCCATTTGCAAGCAGAGTTGCAGGGCCAGCGATGCGTGCAGGCTTTATTTTCAGTCAGTGGGGGACGCGAGCGATGAGGGGAAGCTTCTGAGGAGCTTTGAATCTGAGGAAAATGTTGGGGTTTTGCGTAGGGAAGTAAAGAGATTGGAGGTGAAGGTTTCGGGGCTCACTTCTGAGCTGGAACGGCAAACAAAGGAATTGGAAGGAGTTAAGGAGGAGCTTTGTATTTGCAAGGAGGAGGCAAAGACAGAAACAGCATTAAAGAGTGAGGCTCTAAGTCAAAAAACGTTCATACAATTCCAGTTACATAAAAAATCAGAGGAACTTGAGAAGTCAAGTTTGGAGTCTTTTAGATTAAAAGAAAAGAACATGGCTTTGGCTAAAGAACTTGCCGCATTAAAATTAGTGTCTGATCTGGACATCGATGAAGAGGAGGTTTTGAAACTTGCCACTTTCGGTAATGGGGCCAACAGTAAAGACACTATAGATACATTGAAAAGATCTCTGGTCATGCGGAACAGGAGTTACAAAGAATTGATGGCCAAGTGCAATGTTCTTGGAAGAGGCGAGGCTCGTTATAGCAAAAAGCTTGAGAAAGCTAAAGAAAAGATCACGAAACTGAAGGCAAAGGTACAAGAACTGGAGACATTAGCTGAAGCAAAAGAAAATGAATATCTGATGTCGCTTAAACTTTCAAAAAGAACGAAGAGTTCAAAGAATCTTGAAAATAAGTACACTGATTCTGATGCATTGACAGCTTCCAAATTTTCAGTAGAAAAACCAGGCAAACAAATCTCAGCACCCAAATCAGGAATAAACCTGGCTGCAAACGACAACTGTAAATCTTTTCAATCTTTGAAGATCGAGAACTCCAATGCTACTACAAATAAGACTGTGAATATTAGTAATGAAACTCCTGATAAAAAGAGAGACTATATCACAATTGATGAAGATGAATTAGAAGGCACTAAAGCTTTGCATGGATGTTCAAAACACAACAAGAAAGAACGAGACATGAATGATATTGCTTGTACCAAGCCTTCTCTAGCGAAGCTAGAGACCATGTCTGCTACAAAGACCAAAACATTATTGCAAGGAAAATGTACTTTGGCCGAGTCTCCCAGAGTTGATGTTGACATTGACATGACTAACAATTCAGCTGGTCCTATGGATGAAGATGTAACTTTACAAACCACCATTAACCAACCTGTGGTGAACATTAGAAAGGAGTCACCATTTACACTTTCAAATTCAGGTCCAGATAATATCTGGTTTTCTGGTGGATTGCTTGGTCCTGATGGAACTCATCGGTTTTTGGGAAAATGGTGCAAGCGTGGACAGAAGAGTGAATCATCATCTGCAAAAAGATCAAGTAATGGGGATTTAATAGCTGTCGGGGCTGATGGTAGAGGTGGCAGAATAAAAGTTCTAAGGACTCCTTCCCAAATCCTCTCGGGTGGTAAGGAAAATTCAGCAAGTTCAAAAAGGTCAAAGCTTGGAGATAAAACAAGTAGTTTGCATTCCCAGGGTTGTCTGCAGATAGAACACTTTTTTGGGAGAGTCACTCAGTAA 1740 0.4195 MVDGGEFAGTICSICYEPLNPITEDLQSVSICGHVFHELCLQQWFEYCSKGKKHTCPICKQSCRASDACRLYFQSVGDASDEGKLLRSFESEENVGVLRREVKRLEVKVSGLTSELERQTKELEGVKEELCICKEEAKTETALKSEALSQKTFIQFQLHKKSEELEKSSLESFRLKEKNMALAKELAALKLVSDLDIDEEEVLKLATFGNGANSKDTIDTLKRSLVMRNRSYKELMAKCNVLGRGEARYSKKLEKAKEKITKLKAKVQELETLAEAKENEYLMSLKLSKRTKSSKNLENKYTDSDALTASKFSVEKPGKQISAPKSGINLAANDNCKSFQSLKIENSNATTNKTVNISNETPDKKRDYITIDEDELEGTKALHGCSKHNKKERDMNDIACTKPSLAKLETMSATKTKTLLQGKCTLAESPRVDVDIDMTNNSAGPMDEDVTLQTTINQPVVNIRKESPFTLSNSGPDNIWFSGGLLGPDGTHRFLGKWCKRGQKSESSSAKRSSNGDLIAVGADGRGGRIKVLRTPSQILSGGKENSASSKRSKLGDKTSSLHSQGCLQIEHFFGRVTQ 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00713 579 SMART ring_2 12 59 IPR001841 -
Phco1g00713 579 Pfam Ring finger domain 11 60 IPR001841 -
Phco1g00713 579 Coils Coil 102 129 - -
Phco1g00713 579 SMART ringv_2 11 60 IPR011016 GO:0008270
Phco1g00713 579 ProSiteProfiles Zinc finger RING-type profile. 12 60 IPR001841 -
Phco1g00713 579 SUPERFAMILY RING/U-box 10 64 - -
Phco1g00713 579 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 577 - -
Phco1g00713 579 Coils Coil 246 280 - -
Phco1g00713 579 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 180 IPR013083 -
Phco1g00713 579 MobiDBLite consensus disorder prediction 535 561 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00713 1 6536489 6540509 Phco1g00713 1 6536489 6540509 ECH