Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00682 ATGGTAGATAGGGAGCAAGCAAGACCCTTGGCCCCAGCAATAGAGCGTCCAAGCAGTGAAGAAGATGACACCTCTCTTCAACCCCAAAAACAAGCTCACAAAAAACTCATCAAACGATGTGCATGCCCATTAATCTTTCTACTTCTCCTAGCAATAGTGATCATAGTTTTGATCTTCACAGTATTTCGTGTCAAGGACCCTGTGATCACCATGAACGGTGTCAAAATCACAAAGCTGGAACTTTCCAACACCATGACCCCTCAATCCGGGGCCAACATGTCCTTAGTCGCAGATGTGTCAGTGAAAAACCCCAACGTTGCGTCCTTTAGGTATAGCAACACCACCACGAGTTTGTACTATCGTGGTATCATGGTTGGGGAGGCAAGAGGACCGCCTGGGAGGGCCAAGGCTAGAAGAACAATAAGGATGAATGTAACCATTGATGTGATCGCGGATCGTGTGGTTTCTAGCCCGGATTTCAGAACGGATCTGGGTTCAGGGTTGATGACTATGAGTAGCTTCTCTAGAGTTCCGGGGCAGGTGAAGATCTTGAACCTGTTTAAGAGACATGTTGTTGTGAAAATGAACTGCTCCACCACTTTTAATATCTCAACACAGGCTATTAAGGAGCAGAGTTGTTTGCGGAAGGTTAAACTTTAG 660 0.4606 MVDREQARPLAPAIERPSSEEDDTSLQPQKQAHKKLIKRCACPLIFLLLLAIVIIVLIFTVFRVKDPVITMNGVKITKLELSNTMTPQSGANMSLVADVSVKNPNVASFRYSNTTTSLYYRGIMVGEARGPPGRAKARRTIRMNVTIDVIADRVVSSPDFRTDLGSGLMTMSSFSRVPGQVKILNLFKRHVVVKMNCSTTFNISTQAIKEQSCLRKVKL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00682 219 Pfam Late embryogenesis abundant protein 99 198 IPR004864 -
Phco1g00682 219 SUPERFAMILY LEA14-like 48 156 - -
Phco1g00682 219 MobiDBLite consensus disorder prediction 1 27 - -
Phco1g00682 219 Gene3D - 53 206 - -
Phco1g00682 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 32 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00682 Phco-Chr1 6189650 6190309 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00682 1 6189650 6190309 Phco1g00682 1 6189650 6190309 ECH