Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00679 ATGAAATCTTTCAATATTCTCAGTCCTGAAGATAAGGGAATGACAAAACAGAATGTTAATACTAAGTTAAAAAAGTGGAGAAGTGTTTACTATTTTATCTTTGTACCGGGTGCTCTTGCTCTTCTCCTCTCTTTTGCTGCCATGTCCAAGTTCCTCTCCTTCAAGTCATTTCTTGGTACTGAATCTTTATACTCAAATCTGAATCCTGAGGTCTCATATGGAAATGAAAATGAAGTGATGATGGTTGAAATTGTGATTCAGAAAATTCAAGAGCAAATGGAAAAACTGAGGGAAACAAAACAGGATCCATCATCATCCCCATCTGCACTGCAGCAAGCTGCATTTCTTGCTGATATATTAGGACTTCTTGAGTCAGCAGCGACGTCTCATCAACACAATGAAGGGAATAATCAGCAAAATGGTAGTTTCACCAGTCATCCTCTGGTGAGAAAAAAGAAACGATCAGATGAACCTGCTGATTACTTTCTGCGAGAAGAGATTCGCAAGTATGTCAGGATCAAGCCCAACAGATTAGGAAAACAAAATTTTATGGGTGCCAATGCAAGCTTCGCCAGCATAGGACATGCGTGCTTTGCCATGAAGGAAGAGCTAGAAGAATACATGGATTATGATGTTGGTGAGATCTGCAATGATGACTGGAAACTAGCTCAAAGGCTTATGGTTCATGGCTGTGATCCTTTACCAAGGAGAAGGTGTTTTTCAAGGGCCCCTAAGCTATACAGTCAGCCATTTCCCATCACTGAATCCTTGTGGAAACTCCCTGATGATAGAAATGTCAGATGGAGTCAATACCGGTGCAAGAACTTTGCTTGTCTCGCTGGCAACACCACTCCTAAGGGATTCTTCAAGTGTGCAGACTGCTTCAACCTCACCAACCATGAGATGCCCAGATGGGTGAGCCTTGAGGCTGATTCAAACCAGACAGCTGATTTCCTTATTTCTGAGGTTCTTGGACTTAAGCCAGGAGAGGTCAGAATAGGATTGGACTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGAATTCAATGTGACAATAATTTCAGCCACAATCAATTTTGGGGCACCCTTCAATGAAATGATAGCTCTGAGAGGACTTGTTCCTCTCTACTTGACTATTAATCAAAGGCTTCCATTTTTTGACAATACCCTGGATTTGATTCACACAACTAGGTTTCTAGATGGATGGATTGATTTTGTTCTCCTTGAGTTCATACTGTATGACTGGGATAGAGTTCTGAGACCAGGGGGTTTGCTTTGGATTGACAGCTTTTTCTGCTTGAAGGAAGATTTGTATGACTACTTGAAGGCCTTCAAAATGCTGAGATATAAGGAACTCAAATGGGTGGTTGTTCCAAAGCTTGATAAAGATGACCAGGAAATGTTCTTCTCTGCTGTTTTAGAGAAGCCTCCTAGGCCATTCAGGTGA 1455 0.4172 MKSFNILSPEDKGMTKQNVNTKLKKWRSVYYFIFVPGALALLLSFAAMSKFLSFKSFLGTESLYSNLNPEVSYGNENEVMMVEIVIQKIQEQMEKLRETKQDPSSSPSALQQAAFLADILGLLESAATSHQHNEGNNQQNGSFTSHPLVRKKKRSDEPADYFLREEIRKYVRIKPNRLGKQNFMGANASFASIGHACFAMKEELEEYMDYDVGEICNDDWKLAQRLMVHGCDPLPRRRCFSRAPKLYSQPFPITESLWKLPDDRNVRWSQYRCKNFACLAGNTTPKGFFKCADCFNLTNHEMPRWVSLEADSNQTADFLISEVLGLKPGEVRIGLDFSVGTGTFAARMREFNVTIISATINFGAPFNEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLEFILYDWDRVLRPGGLLWIDSFFCLKEDLYDYLKAFKMLRYKELKWVVVPKLDKDDQEMFFSAVLEKPPRPFR 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00679 484 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 302 479 IPR029063 -
Phco1g00679 484 MobiDBLite consensus disorder prediction 129 146 - -
Phco1g00679 484 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 325 434 IPR004159 GO:0008168
Phco1g00679 484 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 61 482 - -
Phco1g00679 484 Coils Coil 79 102 - -
Phco1g00679 484 MobiDBLite consensus disorder prediction 129 155 - -
Phco1g00679 484 Gene3D Vaccinia Virus protein VP39 304 462 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00679 Phco-Chr1 6183140 6184594 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00679 1 6183140 6184594 Phco1g00679 1 6183140 6184594 ECH