Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00661 ATGATGCCAATCAGAAGTATGGACTCATGCCCGTACCAGAGAAACCAAATGCCATTCCCTCAGTATTATCATCCTGGCATTGAGGCTTTTCCTCCTCAAATGAAGATTGATCCATCCAAACCACACTTTTCTTATGACCAACGTTGGCCCTGTGCAGGCAATTATGGGCACCCTATTCCCCCACATTTATGCTGTGGCCACAACAACTTCCCTTGTAATTATAGCTACATGCCTTCATATCCTCACGCTCCTTCTCCAATGTACTATTCTGGAGGTTGTCCTGTATATAGTGAACCGTATTTTGTTCCTTATTCTCCACAACCACATCATGCTATGGAGCTTCCCAGATATGAATATGACAAATATATGCCCCGTGATCATCATTGTTGTAGTTGTCCTAATCATTCATGCAACCCAAAGGAAGGTAGAAGTGTGAAGATTGAAGAGCATGAACCTGAGGTTGGAAGGAAAGTCAATGATTCTTTGGTTCCTATTCAGCTCAATAACTATCCATATCCCTTTGTTTTGATTCCACAGGAGTACACAAGTAACAAGCAGCTGAAAAATCCTAATACGATGGAGGTCGGTGAACAAAACAAGCCTCCTAGTCTTGAGAGTTCTAATGCTGTTGCACAGCCAGCACAAGAGCCTAAAGAGCCTAGAGTATGGAATGGATGGTTACCCTTTGATATAAAGGGTGCCCCAAGCATGATTCATGATGGACATGGAATAAGAAACCAGAAACAGGAGTCTGGCAACAATAGAGGGGAAACTGAAGATGGAGAAATGGACCAGAAACGTCAAAGCGAACAGAAGAGGTCAGAATTCCCGTTCCCTGTCTTCTGGTTTCCTTATTACAATAAGCTGGAGAGTGGAGAGACTAACAACCAGGAGAAGAACACTTCTTCGACAAAAATCATTGAGGAGGTGCCTCGGGCATCCAAATCTGTTCCAGTAAAGTCTAATGTTGATGAAGGTGGTAGGAACGGAACCAGATCAAATGAAGCTGCACACTCAGATACAAATGCTTCAGATGTTGCAGAGAAAGTGACTAATGCCAGAAGCATACCTGTGAAGCAGATAGGAAAAAATGTTTCTCTAGATCAAAAGGAAGAGAGTGTGACAAAAAAGGACTCCCGTACTGATGATAAAAATAGACAATCTGCATCTTCACCAAAAGCATCAAAGTTACCTCCTGTTTGTCTGAGAGTTGATCCACTACCAAGGAAGAAAAATGGCAATGGGAGTTCGAGGTCGAGATCCCCAAGTCCACCTTCCTCAAAAGCACAGTCCCAAGTTACATCTGGTGAAACATTAAAGACTCCTGTGTGTGGCACAGAAGATAAGAATCAGCCAAATTTGAATAATCAGCATGCTCCTAAGACCACTGAGAAAGTTGAACCAAAGGAGAAAACCATTCAGGCGTCTGAATATCAAACGAATGAAAACAAGGGTGTTGACTGGAGAGATGGATATCAGAACCAGATAAATGTAAACATGCCCGGTGAAGGTCCGAAACAGACAAGCGATGCCAGCACAGATGGTGATGAATGCAAGAGTGAATATAAAAAGGCAGAGAAAGGAGCAGAAAATATGGTGGATACTACTCAATTAAGGGAAGTGAAGGACTTAAGCACACCAACTGATGTTGGTTGCAAAGAGGGAAGGATCCTGTCAGATAAAGATGCTGCTGTTTTGATACAAGCTGCATACCGCGGTTATGAAATTAGAAAATGGGAACCATTGACGAAACTGAAGCATATAGATGAAGTCAGAAAGGAGGTGACCAATGTTCAAGATCGTGTACAAGCTTTTGAGAGATCTTCTGGTCTTCAAAATGATGACAAGCAAAAAATTGCAATTGGAGAGAACATAATGAGACTCCTGCTGAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTTAGGGAGATCAGAAAATCCTTGGCTAGAGAGCTCACAATCTTGCAAGAAAGGCTTGATTCTTTAATGGCTAACAAACCTCAGCAGCATATGCAGGATATTCAAAAAGATGTTGAAGTGACTCCAACGAACATGAAGAATGAAGAACATTTGCATAAGGAGGAAGAAGAAAAAGTTGTCGTACCAGGAGATTCATATGAAGGCAGTAGTGATGGTGGAAATGTATCTCAGTCACCAGTTGATCCTGTACCAAATGAGGGAGCAGAGTCTGTTATTCTTCCAAATGGTTCTGGTATTGAGGATACTTTTCAAGTAGTTACAGCTGATACATTGAACTCTACTAGTGATATATCCGAGACTGGCAAAATGGCTGTGGAACCCGAAGACAAATCAGAAGCGAAAGACATTCCCATTGAGGTTGATAAATTGGATACGACTGTTTGGGAAGAATTGCCAGTGGGAGTTATTGATGAAGATAGCAATGATGCTAGTATTGAGAAGGAAGAACACGATAATATTGGTTCTGGAAGTCTACCAGCCATGGTGAATGATTCGGAGAACCATGCAATGATGGAACTTCCGGTGGGACTACTTGATGAAGATGAAAGGGACAATGAAATGAATATTTCTAAAGAAGAAACACAAACTAAAAATGAGATATTTATTGAGGAGCTTCCAGTGCGACTACTTGATGAGAAAACAGAAGAATATGAAGTTGAGAAGCGTGATGAAGCTAAGCCTAAAGAGGTTCTACTAGCTCAAGAAGGGGAATGTAATGAAGAAGAGGAAACAAGTTCTTCCACAGATAATACTTCAAAAGCAACTCAACTAGAGCAACAGCAGCAACCACTGGAAGATCAAGAGGTGCAGTCTTCTGGGGAATCAGATGGATGGGTAAAAATTGAGTTCAACAAAGATGAGCTTCAGTCATGTGAGGGAGTTGGAACTGATATTGAGTCGCCACCTTTGACAACAAATGTCAATGATCGTGAACCAGGAAATGAAGATGTGTGCTTGGAAGCAAATGATGTAAACAAGAGCTTACCCGAGCAAATGGAGTTCGTGGCTATCAATGACGCACAAAAGGAAGAGGAACCAGAAGGAAAGATTGCAGTGAAGGAGACACAAGAGGATGGTGAAGAGAGAGTTGGTGAAACTTGGAGTGAAGAGAAAACTGAACTCTTTGCAACATCAGCTGCATTAGAAGAGGTACCTGTGGCTGATGATGATGAAGGGTTAAAGGGTGAGTCAAAGTTAGTGGAGGAAAATGAGAAGCTAAGGAAGATGATGAAGAAGTTGGTTGAGGCTGGGAATGAACAGTTAAGTGTAATATCAGATTTAACTGGCAGAGTGAAGGAGTTGGAGAAGAGATTAGCCCGGAGCAGAAGCAAGAGAGTGAAGACAAAACGGTGTAAACCAGCAACTTCCAAAATGTCTAGCATGAAACCACTGAACTCGATGTAA 3387 0.4184 MMPIRSMDSCPYQRNQMPFPQYYHPGIEAFPPQMKIDPSKPHFSYDQRWPCAGNYGHPIPPHLCCGHNNFPCNYSYMPSYPHAPSPMYYSGGCPVYSEPYFVPYSPQPHHAMELPRYEYDKYMPRDHHCCSCPNHSCNPKEGRSVKIEEHEPEVGRKVNDSLVPIQLNNYPYPFVLIPQEYTSNKQLKNPNTMEVGEQNKPPSLESSNAVAQPAQEPKEPRVWNGWLPFDIKGAPSMIHDGHGIRNQKQESGNNRGETEDGEMDQKRQSEQKRSEFPFPVFWFPYYNKLESGETNNQEKNTSSTKIIEEVPRASKSVPVKSNVDEGGRNGTRSNEAAHSDTNASDVAEKVTNARSIPVKQIGKNVSLDQKEESVTKKDSRTDDKNRQSASSPKASKLPPVCLRVDPLPRKKNGNGSSRSRSPSPPSSKAQSQVTSGETLKTPVCGTEDKNQPNLNNQHAPKTTEKVEPKEKTIQASEYQTNENKGVDWRDGYQNQINVNMPGEGPKQTSDASTDGDECKSEYKKAEKGAENMVDTTQLREVKDLSTPTDVGCKEGRILSDKDAAVLIQAAYRGYEIRKWEPLTKLKHIDEVRKEVTNVQDRVQAFERSSGLQNDDKQKIAIGENIMRLLLKLDTIQGLHPSFREIRKSLARELTILQERLDSLMANKPQQHMQDIQKDVEVTPTNMKNEEHLHKEEEEKVVVPGDSYEGSSDGGNVSQSPVDPVPNEGAESVILPNGSGIEDTFQVVTADTLNSTSDISETGKMAVEPEDKSEAKDIPIEVDKLDTTVWEELPVGVIDEDSNDASIEKEEHDNIGSGSLPAMVNDSENHAMMELPVGLLDEDERDNEMNISKEETQTKNEIFIEELPVRLLDEKTEEYEVEKRDEAKPKEVLLAQEGECNEEEETSSSTDNTSKATQLEQQQQPLEDQEVQSSGESDGWVKIEFNKDELQSCEGVGTDIESPPLTTNVNDREPGNEDVCLEANDVNKSLPEQMEFVAINDAQKEEEPEGKIAVKETQEDGEERVGETWSEEKTELFATSAALEEVPVADDDEGLKGESKLVEENEKLRKMMKKLVEAGNEQLSVISDLTGRVKELEKRLARSRSKRVKTKRCKPATSKMSSMKPLNSM 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00661 1128 SUPERFAMILY BAG domain 579 663 IPR036533 GO:0051087
Phco1g00661 1128 MobiDBLite consensus disorder prediction 292 536 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 326 349 - -
Phco1g00661 1128 Coils Coil 588 608 - -
Phco1g00661 1128 Gene3D BAG domain 575 669 IPR036533 GO:0051087
Phco1g00661 1128 FunFam BAG family molecular chaperone regulator 6 577 668 - -
Phco1g00661 1128 ProSiteProfiles BAG domain profile. 587 664 IPR003103 GO:0051087
Phco1g00661 1128 MobiDBLite consensus disorder prediction 365 389 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 252 273 - -
Phco1g00661 1128 Coils Coil 646 666 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 190 222 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 1114 1128 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 234 274 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 292 309 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 190 213 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 510 530 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 412 461 - -
Phco1g00661 1128 SMART BAG_1 587 664 IPR003103 GO:0051087
Phco1g00661 1128 ProSiteProfiles IQ motif profile. 560 589 IPR000048 GO:0005515
Phco1g00661 1128 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 826 1111 IPR040400 -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 710 724 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 878 976 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 692 724 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 909 935 - -
Phco1g00661 1128 Coils Coil 1057 1080 - -
Phco1g00661 1128 Coils Coil 1085 1105 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 473 509 - -
Phco1g00661 1128 Pfam BAG domain 588 662 IPR003103 GO:0051087
Phco1g00661 1128 MobiDBLite consensus disorder prediction 1099 1128 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 878 896 - -
Phco1g00661 1128 MobiDBLite consensus disorder prediction 840 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00661 Phco-Chr1 6062890 6066650 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00661 1 6062890 6066650 Phco1g00661 1 6062890 6066650 ECH