Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00617 ATGGTGAAGAGAGTGAGGTCTGATTCGGGACCATTGTCCTTGCAAAAGCACAACCATATGTGTGTCAAGTTAGGAGTCTCAATTTTCTTGGTGGGTCTCGCTGTTCGCCTTCTCTTGTGGGATTCATTCAGTTTCTCATCAGTGGTGGAGTCACCTCCTCTAGAAGATGCAAAAGCAGTTTCCCCTGTTTTATCTTCCTCTGATCTTCAGCCTTTTGATTCTGATGACTTTCCCGAAAGTAATCAGAATCAGACTCAAATCTCTAAGGATGAAAAATGTGATCTTTTTGTGGGAGAATGGGTACCAGACCAATCTGGGCCAGAGTACACTAATGAGAGCTGCCGTGTGATTGAACCTCATCAAAATTGTATGAAGAATGGACGTCCTGAGTCAGGGTACCTTAACTGGAGATGGAGTCCAAGAAACTGTGAATTGCCCAAGTTCAATCCCAAGAAGTTTCTTAAGTTCATGAGAAACAAATCATTGTCTTTCATTGGTGATTCCATCTCCCGTAACCATGTTCAGTCCCTACTTTGCATTCTCTCAAAGGTGGAGCCAGCTGTTGAAATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCGCTCTCATAACTTCACACTATCAGTAATCTGGACCCCTTTCCTTGTTAAAGCAGCTATATTTGAGGACATGAATGGAGTTACCTCATCAGACATACAACTTTATGTTGACACTCTAGACCAGTGGACCAACCAATATGAGAACTTTGACTATGTTGTCATTGGTGGTGGAAAATGGTTTCTCAAGACTGCAATATACCATGAAAACAGAACAGTCACTGGGTGCCACTACTGCCCTGGAAAGAACTTAACAGAGCTAGGATTTGAGTATGCATACCGCAAAGTACTACAAGAAGTTTTCAAGTTCTTCACAAATTCTAACCACAAGGCCACTGTTCTCTTCAGAACCACCACACCTGACCACTTTGAGAATGGGGAGTGGTTTAGTGGAGGGTACTGCAACAGAACTGTACCCTTCAAAGAGGGTCAGATACATATGATAGATGTGGATTCCATCATGAGAGGTATTGAACTTGAAGAGTTTGAGAAGGCTGCTTCCCTAGGATCTCAAAGGGTGAACTTGAAACTTTTGGACACAACTCTCCTTTCATTGCTGAGACCAGATGGACATCCTGGACCTTACAGGAAGTTCCAGCCATTTGCAAAAGACAAGAATGCTAAAGTTCAGAATGATTGTCTACATTGGTGTTTGCCAGGACCAATTGACTCATGGAATGACATAATAATGCAAATGCTAGTCAATGCCTAA 1317 0.4214 MVKRVRSDSGPLSLQKHNHMCVKLGVSIFLVGLAVRLLLWDSFSFSSVVESPPLEDAKAVSPVLSSSDLQPFDSDDFPESNQNQTQISKDEKCDLFVGEWVPDQSGPEYTNESCRVIEPHQNCMKNGRPESGYLNWRWSPRNCELPKFNPKKFLKFMRNKSLSFIGDSISRNHVQSLLCILSKVEPAVEIYHDKEYRSKIWKFRSHNFTLSVIWTPFLVKAAIFEDMNGVTSSDIQLYVDTLDQWTNQYENFDYVVIGGGKWFLKTAIYHENRTVTGCHYCPGKNLTELGFEYAYRKVLQEVFKFFTNSNHKATVLFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIHMIDVDSIMRGIELEEFEKAASLGSQRVNLKLLDTTLLSLLRPDGHPGPYRKFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMQMLVNA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00617 438 Pfam PMR5 N terminal Domain 91 144 IPR025846 -
Phco1g00617 438 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 49 431 IPR029962 GO:0016413
Phco1g00617 438 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 145 434 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00617 Phco-Chr1 5469946 5473118 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00617 1 5469946 5473118 Phco1g00617 1 5469946 5473118 ECH
Phco11g01250 11 9378925 9381768 Phco1g00617 1 5469946 5473118 PCT