Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00608 ATGATGAACGGGGATTCTCGCAGTGCTCTTGAGGCACAGTGCATAAGGAGGCATCACAGACATGAACCAAGGGAAAACCAGTGCTCTTCTGCTCTTGTTAAACACATCAAAGCCCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCCCAGAAATACAAGCCATTTGTTAGCAGATGTATCATGCAAGGGGACCTTGGCATTGGAAGTGTCAGAGAAGTGAATGTTAAATCTGGGCTTCCAGCCACAACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATTCTTGGCATCAGGATTGTTGGAGGTGACCATAGGCTGAGGAACTATTCTTCCATAATAACAGTCCATCCAGAGGTGATTGAGGGGAGACCTGGAACAATGGTGATTGAATCATTTGTGGTGGATGTGCCTGATGGGAACACCAAGGATGAAACTTGTTACTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCTCTGGCTGATGTCTCCGAGAGGATGGCAGTCCAAGGCCGTACTGATCCCATCAACCATTAA 558 0.4677 MMNGDSRSALEAQCIRRHHRHEPRENQCSSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00608 185 Gene3D - 2 181 IPR023393 -
Phco1g00608 185 PANTHER - 25 169 - -
Phco1g00608 185 Pfam Polyketide cyclase / dehydrase and lipid transport 32 172 IPR019587 -
Phco1g00608 185 SUPERFAMILY Bet v1-like 28 169 - -
Phco1g00608 185 CDD PYR_PYL_RCAR_like 28 172 - -
Phco1g00608 185 FunFam Abscisic acid receptor PYL9 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00608 Phco-Chr1 5381937 5384910 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00608 1 5381937 5384910 Phco2g00403 2 3465544 3467862 ECH
Phco1g00608 1 5381937 5384910 Phco1g00608 1 5381937 5384910 ECH