Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00607 ATGCCTTATTCTGCAGTTTCCATTCCAACCTCTATAACTTCCTCTACAACAATGGATATCACAAAAGAGAATAAAGTGTTTCTCCACTCACTCTCCAACAAAGGCTTATGCAACCATTCAACAATCACGAGGTCTCACCCTAGCAATCTTCTATGTTGCTCCTATAACCGCTTCCGAGGAACATCAATGGAACCAAAGCATAAAAGCAGGCACTCCATACTAGTTTTTCCACTTCAATTTTCAGTGTCCATTCTTCCAAATCCACTTCGCTCATTCTTATTTGACCCAGAAACGAGGAGGGAAATGGACATGGGGCAGAAGGGTATCAATCTTAAGGAAAACATGGTGGAAAGCACCGCAGAAGTGACTATAAATAGAGCCAACTGGGTAAAAAGATTAACCGGAATTAAGACTTATTGGAGAGGCAAGCGGCCTGAAGAGAGCATGGATTCAGATATAGTATCTAAACACGATAATGAGTGTGATCGTGATGAAGATGATAGTGTTTGTGTGGCAGGTTCTGAAGAAGAAAATGGAAAAGAGGAAGATGGACAAGAAGTGACATTTGATCGTGACTCATTCTCAAAATATCTTGTCCCGGTTCCTTGGTCTGATACCAAACTGTTCTCGAAGCTGGCTTTCCTGTGCCACATGGCTTATGTCATACCACAAATCAAGGCTAAGGACTTGGGGAGATACTATGGTCTTCAATTCGTTACATCATCTTTGAAAAAGAGAAAGAAAAAGAAAGGAGATGTGACTAAGATTAAAGCAAAACTTGATCAGGACTCCATTTGTGTGCCTATGGATGCTTCAGTAGCCTCTCAAGATGGCTCAGAGAAGGGTGATGATAATGAACAGAAGCATCAAATGAAGCTTGCATATGATATTACTGCCTCAGCTGCCTCTTATGTCCAATCACGTGCTAAGGACCTTTTGTCTCTTGCCTCTAAGTCAAAACAGAAAAGTGGCAATGAGGACTTCAATGGAAGAGAAGACTCACCTCATGAGGAGGCTGATGAAACTCCACAGGTTGACAAGTCCAAGTTTGGAGTCAATGTTGCAGCATTAACTATGACTGTTGTGGCTGCAGCAGGATCAGCAATGGACCTTCAGTTACTTCGTTCCTCGTCTTGTGAATGGTTTGTTTGTGATGATCCCAACACGAACACTCGATGCTTTGCCATTCAGGGATCTTATTCCGTGGCATCTTGGCAAGCAAACCTCTCATTTGAGCCTACCACATTCGAGGACACAGATGTTCTTGTTCACAGTGGAATATATGAAGCTGCCAAGGGAATGTATGAGCAATTCATGCCAGAAATAATGGACCATTTAAAGAGACATGGAGATAGTGCAAAGCTTCAATTCACTGGACATTCCCTAGGGGGCAGTCTCTCACTTTTGGTGTATTTGATGCTATTGACTAGGAAGGTTGTGAGTCCCTCAACTCTTCTACCAGTGGTGACTTTTGGTTCTCCATTTGTGTTATGTGGAGGCCAAAAATTACTCAATGAGCTTGGCCTGGACGATAGCTTCATTCACTGTGTAATGATGCATAGAGATATTGTTCCCAGGATCTTCTCATGCAGTTTCCCTAACCATGTTATAACAGTCCTTAAGCGCTTAAAAGGCTCATTTGTATCACATCCTTGTCTGATAGAAAAGAAGCTATTGTACTCACCATTGGGTAAAATATTCATTCTCCAACCAGATGAGAAAGCATCTCCTCTACATCCTTTACTCCCATCAGGAAGTGGTTTCTATGTTGTAGACAGTAGCAGATGTGGATACTCTCCAATTGTTCTAAGAACATTCCTCAATCAACCACACCCCATTGATACCCTAAGCAATCCAAAAGCTTATGGCTCAGATGGCACAGTTTTAAGAGACCATGATTGTAACAACTATCTTATAGCACTGAATGGAGTTTTGGCACAAAATTCAAAGATTGTTGTCAGGACAAGGAGATCAAAGCAGCCACGAAAAATATTTAAGAGAAAGATGAGAAAGTAA 2016 0.4162 MPYSAVSIPTSITSSTTMDITKENKVFLHSLSNKGLCNHSTITRSHPSNLLCCSYNRFRGTSMEPKHKSRHSILVFPLQFSVSILPNPLRSFLFDPETRREMDMGQKGINLKENMVESTAEVTINRANWVKRLTGIKTYWRGKRPEESMDSDIVSKHDNECDRDEDDSVCVAGSEEENGKEEDGQEVTFDRDSFSKYLVPVPWSDTKLFSKLAFLCHMAYVIPQIKAKDLGRYYGLQFVTSSLKKRKKKKGDVTKIKAKLDQDSICVPMDASVASQDGSEKGDDNEQKHQMKLAYDITASAASYVQSRAKDLLSLASKSKQKSGNEDFNGREDSPHEEADETPQVDKSKFGVNVAALTMTVVAAAGSAMDLQLLRSSSCEWFVCDDPNTNTRCFAIQGSYSVASWQANLSFEPTTFEDTDVLVHSGIYEAAKGMYEQFMPEIMDHLKRHGDSAKLQFTGHSLGGSLSLLVYLMLLTRKVVSPSTLLPVVTFGSPFVLCGGQKLLNELGLDDSFIHCVMMHRDIVPRIFSCSFPNHVITVLKRLKGSFVSHPCLIEKKLLYSPLGKIFILQPDEKASPLHPLLPSGSGFYVVDSSRCGYSPIVLRTFLNQPHPIDTLSNPKAYGSDGTVLRDHDCNNYLIALNGVLAQNSKIVVRTRRSKQPRKIFKRKMRK 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00607 671 Pfam Lipase (class 3) 394 530 IPR002921 GO:0006629
Phco1g00607 671 SUPERFAMILY alpha/beta-Hydrolases 377 530 IPR029058 -
Phco1g00607 671 MobiDBLite consensus disorder prediction 316 346 - -
Phco1g00607 671 CDD Lipase_3 345 531 - -
Phco1g00607 671 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 664 IPR043367 GO:0008970
Phco1g00607 671 Gene3D alpha/beta hydrolase 340 550 IPR029058 -
Phco1g00607 671 MobiDBLite consensus disorder prediction 324 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00607 Phco-Chr1 5348307 5352074 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00607 1 5348307 5352074 Phco1g00607 1 5348307 5352074 ECH
Phco11g01241 11 9300770 9303467 Phco1g00607 1 5348307 5352074 PCT