Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00603 ATGGGATACTTATCACAGCCATCAGATCACTCAAACATGAAACCAATCTCACTTGCAAAGATTGATGAGAATGGAGGATTGTGTTCTTATGCTTCATGGCTAGGAAAGCATCCTTCTGTGTTGGACAACTTTGATGAAGTGATGAAGGTTGCTGAAGGGAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACACTCTCACCGATTGTAGATGACCCTGATAAGGCTTACATGAGTGATGCTATGCGCGCAGCTGTGCGTGAAGTTGCTTATTGTTTTCCCACTGCCATTGTTAGTGGAAGGCGTAAGGATAAGGTGTATGAATTTGTGAAGTTAAGGAATGTTTACTATGCTGGAAGTCATGGTATGGATATATCAACTCCATTAGGGTCTTCAAAATGTGAAGATCAGAAGCATCAGATAAAGTGTGTTGATGAAAAGGGTAATCATGTTGTTCACTTTCATCCTGCAAAAGAATTTTTGCCAACAATTCAAGAGATAATTAAGGTTTTGAAAGAAAATACAAGAAGAATAAAGGGGTCTATGATTGAGGATAACATGTTCTGTGTCACTGTACACTATCGGTGTGTGAAAAATGAAGAGGATGTTAGTGTTCTGAGAGAAATGGTGGAGTCCATAATGAAACCTCACACCAATTTCCACATATCAAGTGGAAAAAAGGTTATGGAGATACGTCCAAATGTAAACTGGGACAAAGGACGTGCTCTTATGTATTTGCTTCACACTCTTGGCTTTGACAACTTCAACAATGTTCTTCCATTGTACATTGGGGATGATAGAACAGATGAAGATGCTTTTAAGGTTATAAGACGCATTGGACATGGTTTTCCCATTGTTGTTTCTTCCATTGCAAAGGAGACTGAGGCTTCATTTTCCCTGCGTGACCCTTCTGATGTGCTGGCTTTCTTGCTTCGTTTAACAAAATGGAAGAAGAACCTGTTACACAAAACTAAATAA 978 0.3906 MGYLSQPSDHSNMKPISLAKIDENGGLCSYASWLGKHPSVLDNFDEVMKVAEGKEIVVFLDYDGTLSPIVDDPDKAYMSDAMRAAVREVAYCFPTAIVSGRRKDKVYEFVKLRNVYYAGSHGMDISTPLGSSKCEDQKHQIKCVDEKGNHVVHFHPAKEFLPTIQEIIKVLKENTRRIKGSMIEDNMFCVTVHYRCVKNEEDVSVLREMVESIMKPHTNFHISSGKKVMEIRPNVNWDKGRALMYLLHTLGFDNFNNVLPLYIGDDRTDEDAFKVIRRIGHGFPIVVSSIAKETEASFSLRDPSDVLAFLLRLTKWKKNLLHKTK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00603 325 CDD HAD_TPP 57 308 - -
Phco1g00603 325 Gene3D - 58 300 IPR023214 -
Phco1g00603 325 FunFam Trehalose 6-phosphate phosphatase 157 234 - -
Phco1g00603 325 NCBIfam HAD-IIB family hydrolase 58 280 IPR006379 -
Phco1g00603 325 FunFam - 56 108 - -
Phco1g00603 325 SUPERFAMILY HAD-like 57 318 IPR036412 -
Phco1g00603 325 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 24 319 IPR044651 GO:0004805|GO:0005992
Phco1g00603 325 Gene3D - 138 234 - -
Phco1g00603 325 NCBIfam trehalose-phosphatase 54 315 IPR003337 GO:0003824|GO:0005992
Phco1g00603 325 FunFam Trehalose 6-phosphate phosphatase 163 323 - -
Phco1g00603 325 Pfam Trehalose-phosphatase 59 304 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00603 Phco-Chr1 5316745 5319971 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00603 1 5316745 5319971 Phco1g00603 1 5316745 5319971 ECH