Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00523 ATGTTGCCCTTGCAGATTGAGAATCTGACTGTTACAGAATATACACAGCAACCTAAGTACTTCCTCTCTTCCACAATGACTCCAATGGAAGCACAAAGCTCTCAGCAAACGCAAGTTATTGAGATCAGTGGAGATTTTCCTGATGGTGGAAGAAAGATTTGTGGGGAAGCACCATGTGGATTTGCTGATGCCGGATCCATCTCCAAGGATTCTGAAGAAAGATCAACTTCTATGCGAAAGCTCCTTATGGCAGTGATCCTTTGTGTTATTTTTATGACTGTTGAACTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCCTTAGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTCTGGTATATGAAGCCATTGATAGAATCATTGCTGGTCCTAAAAGCGTGGATGGTTTCCTAATGTTTTTAGTTTCCGCATTTGGTCTTGTGGTTAATATCATTATGGCTTTGCTATTGGGTCATGATCATGGCCACGGACATAATGGACATGGACATGGACATGGACATGGACATGGACATGGTCATGGTCATGGTCATGGTCATAGCCACAGTCACGGAATTACAGTGTCTACCCATCACGATGCAACAAAACATACAAAAGATGAGCACCATCACACACATGATGATCACACAGACCATCACGATGAAAAGCATTCAAACGATGCTATCCATCATACTCATGAAGATCACTTGCACCATCATGATCACAAAGAACTTAACCAACCTCTTCTTGACGAATCAAAAGTTGGAACTAAGAAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTCCATGTACTTGGAGATTCTATCCAGAGTATCGGCGTAATGATTGGGGGAGCAGTCATATGGTATAAACCCGAGTGGCAAATAGTTGATTTAATTTGCACTCTAATATTTTCAGTAATCGTTTTGGTAACAACCATCAATATGCTGCGAAATATTTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGGGGGCTGTTGGATATGGAAGATGTAGTGGCCGTTCATGAACTGCACATATGGGCCATTACAGTGGGAAAAGTTCTACTAGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACGTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTCTATAACATCAGTCATGTAACCATACAGATAGAGCGCTAG 1356 0.4196 MLPLQIENLTVTEYTQQPKYFLSSTMTPMEAQSSQQTQVIEISGDFPDGGRKICGEAPCGFADAGSISKDSEERSTSMRKLLMAVILCVIFMTVELVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHNGHGHGHGHGHGHGHGHGHGHSHSHGITVSTHHDATKHTKDEHHHTHDDHTDHHDEKHSNDAIHHTHEDHLHHHDHKELNQPLLDESKVGTKKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00523 451 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 48 451 - -
Phco1g00523 451 Gene3D Cation efflux protein transmembrane domain 77 372 IPR027469 -
Phco1g00523 451 MobiDBLite consensus disorder prediction 238 270 - -
Phco1g00523 451 SUPERFAMILY Cation efflux protein transmembrane domain-like 75 374 IPR027469 -
Phco1g00523 451 MobiDBLite consensus disorder prediction 211 270 - -
Phco1g00523 451 Pfam Cation efflux family 81 373 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Phco1g00523 451 MobiDBLite consensus disorder prediction 211 233 - -
Phco1g00523 451 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 379 450 IPR036837 -
Phco1g00523 451 NCBIfam cation diffusion facilitator family transporter 78 451 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00523 Phco-Chr1 4219967 4223381 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00523 1 4219967 4223381 Phco1g00523 1 4219967 4223381 ECH