Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00501 ATGGCAAGTTGCCGCAATTTGAAGAACGCTGTGATAGCATTTTTGGTTCCTCTTCCCTCCGTCTTCTTCTACCTCTCATTCCTCAACCAATACGACTCACCAAATTCCTCATCACTTTGTTCAACTTTGTGGTCATGGTGCTATCACCACCCTCTTCTATTAGCCAACACTCTCTTCTTCCTCAACGTCAATGTTCTCTTCTGGGTCATAGGCCTAATCCAGTCCAGCCACTGGATGATTGACCCCTATTGGACTGTGATACCTGTGATGCTTGTTCACTACTATGCCACTCACCCTTTAGCGCATTATGATTTGTGGAGGTCTAGGATCGTGGTTTTATTGACTTGGGTGTGGAGTGTGAGGCTCACTCATAACTATTTCAGGAGAGAAGGGTGGCAATGGGGTGCCAGGGAAGACTGGCGTTTCACTGAGATGAATGAACAGTATGGAAAGCAATGGTGGTGGATTTCATTCTTTGCTGTCTATGTCTCCCAACAGATGTTTTTGATTGCATTGTCCCTTCCCTTGTATGCGGTCCATACTGTCAATCAGCCATTGAGCATGTGGGACTTGGCGGCTACTGTTGTCTGTTTATTTGGCATTGTGATAGCATACTTTTCTGATACACAGCTCTATGAGTTTGTGAATAGAAACAACAAGCTGAAGGAGCTTGGTAAACCTGTGGCTCCTGTTCTTGACAGTGGCTTGTGGTATTACTGCCGGCATCCAAATTACTTTGGTGAGCAGCTGTGGTGGTGGGGGCTGGCTGTGTTTGCATGGAATCTGGGACTTGGGTGGACCTTTATTGGAGCTTTGGTTAATAGTATGTGTTTGGCTTATGTGACTAAGCTTGTGGAGGACCGAATGTTGAAAAAAGAAAGTAGAGCAAAAGCTTTTAGGCTATATCAAAAGACAACCTCTGTGTGGATACCTTGGTTCAAGTCCTCTCCTTCAGGAGTTAAAAATAAGAATGCTTGA 978 0.4489 MASCRNLKNAVIAFLVPLPSVFFYLSFLNQYDSPNSSSLCSTLWSWCYHHPLLLANTLFFLNVNVLFWVIGLIQSSHWMIDPYWTVIPVMLVHYYATHPLAHYDLWRSRIVVLLTWVWSVRLTHNYFRREGWQWGAREDWRFTEMNEQYGKQWWWISFFAVYVSQQMFLIALSLPLYAVHTVNQPLSMWDLAATVVCLFGIVIAYFSDTQLYEFVNRNNKLKELGKPVAPVLDSGLWYYCRHPNYFGEQLWWWGLAVFAWNLGLGWTFIGALVNSMCLAYVTKLVEDRMLKKESRAKAFRLYQKTTSVWIPWFKSSPSGVKNKNA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00501 325 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 193 262 IPR001104 GO:0006629|GO:0016627
Phco1g00501 325 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 14 313 IPR010721 -
Phco1g00501 325 Pfam Protein of unknown function (DUF1295) 67 306 IPR010721 -
Phco1g00501 325 Gene3D - 104 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00501 Phco-Chr1 3984605 3986292 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00501 1 3984605 3986292 Phco1g00501 1 3984605 3986292 ECH
Phco7g03054 7 49124769 49127043 Phco1g00501 1 3984605 3986292 PCT