Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00483 ATGTATTACTACACTACACGCATTTTTTTGACCTACTTTTTAATGGTTTATAAAATTCTTCTACACCTTGCAGTTTGGAAAAATATATACACGCACGCGCCTTCCCTGTCTCTTCCCTACTCTTTCATCGCATCTTATACCGTCAAATCTCCATCTTCCCTTTGTATATATATAGCCCTCACAATGCGGAAAACCGCTGCAGACAGATTCAGGCGCCTCTTCAATCGTTCACTACTTCTTCCTCGCCACAGTCACAATCACCCTTCCTTTCCTGCTTCTTCCTCTATATCTTCTCACTCTCTGTTTTCCCCCTATCGCTTCTTATTTTCTACTCCATTTTCTTCCATGGCCTCTGATTCCCCTTTCCCAGTCACCGCTCAAAACATCAACCCCAAGGTTCTGAAATGTGAGTACGCCGTTAGAGGAGAGGTTGTCACACTTGCTCAGAATTTGCAAAAAGATTTACTGGCCAATCCCGGTTCTCATCCATTTGACGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGGCTCCAATAACTTTTTTCCGAGAGGTTCTTGCTTTATCTGATCATCCAGCTTTATTGGACAAAAGTGAAACCCAGGGTTTGTTCAGTGCTGATGCAATAGAACGAGCTTGGCAGATTGTGGAACAGATTCCCGGTAGAGCAACTGGTGCCTATAGCCACAGTCAGGGTGTCAAGGGTTTACGTGATACAATAGCTGCTGGGATTGAAGAGCGTGATGGTTTTCCTGCCAATCCTGATGACATTTTCATGACAGATGGTGCAAGCCCGGCAGTCCATAACATGATGCAATTACTCATTAGATCAGAAAATGATGGTATTCTGTGTCCCATTCCACAGTACCCTCTGTACTCAGCCTCAATTACCCTCCATGGTGGCTTCTTGGTACCTTATTATCTAGATGAAGCAACCGGTTGGGGGTTGGAAATACCTGAACTCAAGAAGCAATTGGAGGCTGCCAAGTCTAAGGGCATTAATGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACGGGGCAGGTTCTTGCTGAGGAAAATCAGCGCAATATAGTAGATTTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTTTATGTCCCTGAGAAGAAATTTCACTCATACAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGACATCACCTTAGTATCCTTTCAATCAGTCTCCAAAGGCTACCATGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACAGGCTTTTCTGCAGAAGTAAGGGAACAAATATATAAAATGGCATCTGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCGCCTAAGGTTGGAGACGAGTCCTATGAATCGTACATGGCTGAGAAGGGAAATATTTTGGAGTCGCTTGCTAGGCGTGCAAAGACACTAGAAGATGCATTCAACAAGCTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCCCAAATTCGCCTGTCTCAAAAGGCTATCAAAGCTGCAGGGGATGAAAATACTGCACCTGATAACTTCTATTGCAAGCGCTTGCTTAATGCAACAGGAGTAGTAGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTCAGGTGTACCATTTTGCCTCAAGAAGAAAAGATTCCAGCCATTGTCTCCCGTTTGACAGAGTTCCATGAGAAATTCATGGATGAGTTCCGTGACTAA 1806 0.4385 MYYYTTRIFLTYFLMVYKILLHLAVWKNIYTHAPSLSLPYSFIASYTVKSPSSLCIYIALTMRKTAADRFRRLFNRSLLLPRHSHNHPSFPASSSISSHSLFSPYRFLFSTPFSSMASDSPFPVTAQNINPKVLKCEYAVRGEVVTLAQNLQKDLLANPGSHPFDEILYCNIGNPQSLGQAPITFFREVLALSDHPALLDKSETQGLFSADAIERAWQIVEQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASITLHGGFLVPYYLDEATGWGLEIPELKKQLEAAKSKGINVRALVVINPGNPTGQVLAEENQRNIVDFCKQEGLVLLADEVYQENVYVPEKKFHSYKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKMASVNLCSNISGQILASLVMSPPKVGDESYESYMAEKGNILESLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGDENTAPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRLTEFHEKFMDEFRD 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00483 601 PANTHER ALANINE AMINOTRANSFERASE 116 600 IPR045088 GO:0008483
Phco1g00483 601 CDD AAT_like 214 590 - -
Phco1g00483 601 Coils Coil 487 507 - -
Phco1g00483 601 SUPERFAMILY PLP-dependent transferases 127 595 IPR015424 -
Phco1g00483 601 Pfam Aminotransferase class I and II 225 580 IPR004839 GO:0009058|GO:0030170
Phco1g00483 601 FunFam Alanine aminotransferase 2 178 228 - -
Phco1g00483 601 Gene3D - 178 228 - -
Phco1g00483 601 Gene3D Aspartate Aminotransferase, domain 1 127 599 IPR015422 GO:0003824
Phco1g00483 601 Gene3D - 229 475 IPR015421 GO:0003824
Phco1g00483 601 FunFam alanine aminotransferase 1 464 601 - -
Phco1g00483 601 FunFam alanine aminotransferase 2 229 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00483 Phco-Chr1 3834596 3845388 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00483 1 3834596 3845388 Phco1g00483 1 3834596 3845388 ECH