Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00482 ATGGACCTTCCCAACCACAAATTCTTCCAATCTCCGTCTGCATTGGCAGTGGCAGTGGCACCACATGGGGAAACACTCACCGAGAGCAATATGAACATGTATGGGAAAAGCAAAGACAACCCTTTTGCAGATGACTTCCCTGATCCACTTTGCAAGCTCAACCTGAAGGAAACCTCTGAGTTTGTCAAGTCTTTGCCTGTGCCGAGTGGCAGAGACGAAAGCAGAGGCCACTCTGTTTCACAACAGAGGAGACTATTAGAGGCTCCCTCCACTCCGGGAAGACCAGTTTTCACCTTCAGCTCTGGCCTTCCAAGAAAGAGCTTCCCTTCCAAGTGGGATGATGCAGAGAAATGGCTCATGAGCACTTCTTGCCACGACTCACCTGCTCACAACAACAACAACACCACTCTCAAGGTTTCAGTCTCAGACTCCTCAAAGGTTGCAACCAGACAACAATATGAAGATGTTACCTTTAAGCAGCAAATGGAAAATTTCTCGGAGAAATCGAGGGTCACTGAAGAAAGGGTGTCCAAAGCTGTCCCCAATTTTCACTGGTCTCCTTCATTGGACCACCACCATAACACACTCGGCGCTTTCCATGGTGTTAAAGACATTGTACTCAAAGATAAGTTCACAGACAGCATAGAACCTATTTTGCCAAATTTGAGATATTTAGAGCCGGCTAAGGAAGGGTTCTTGTTTAGGAACCAAGGTGGTGGGGCAATGCAAGATGCTTGCACAGAAGTGGTTCAACATAGAGACATTGGCACTGAGATGACTCCTCTGGGAAGTTCCACAACTTCAAGATGCCACACCCCAGTTAAGATTTCATCACCTCCTCGACACAATACTCCTGCAAGTAGGTCAGGACCATTGGCCTTGGCTAGCACTGCCTGCACTCTTGATGTCATTCAGCTGGAGGAGTGCCATTTTTCTAAACTGCAACTAGGATCACAGTATGATATAGTAACTTCAAATTGGACCTCAAGTGAAGAGGAAGAAAAGGAAATATCAAAAAGCTTGAGGCATAATGGGAGCCACAAAGCTGATTCCGACTGCATAGCTGCTTCATGGGAAGAAGAGGAGAAGACCAAGTGTTGTTTAAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTCCAAAGTGCTAAAGCAGAGGCCAGGTCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAGATCAAACCTTGAAGAGAAGTTGATGAAGAGGATGTCAGTGGTTCACAGGAAAGCTGAGGAGTGGAGAGCAGAAGCTAGACAGCAACACTTGGAGCAAATACAGAAAGCCACTGAGCAAGCTCAAAAGATGATTCATAAACATAACTCACACTTTTCAAAGCCAAGTTCATGTGGTTGCTTCCCTTGCAACAACAACCATCATTGA 1413 0.4565 MDLPNHKFFQSPSALAVAVAPHGETLTESNMNMYGKSKDNPFADDFPDPLCKLNLKETSEFVKSLPVPSGRDESRGHSVSQQRRLLEAPSTPGRPVFTFSSGLPRKSFPSKWDDAEKWLMSTSCHDSPAHNNNNTTLKVSVSDSSKVATRQQYEDVTFKQQMENFSEKSRVTEERVSKAVPNFHWSPSLDHHHNTLGAFHGVKDIVLKDKFTDSIEPILPNLRYLEPAKEGFLFRNQGGGAMQDACTEVVQHRDIGTEMTPLGSSTTSRCHTPVKISSPPRHNTPASRSGPLALASTACTLDVIQLEECHFSKLQLGSQYDIVTSNWTSSEEEEKEISKSLRHNGSHKADSDCIAASWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEARSRKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRAEARQQHLEQIQKATEQAQKMIHKHNSHFSKPSSCGCFPCNNNHH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00482 470 MobiDBLite consensus disorder prediction 258 289 - -
Phco1g00482 470 PANTHER OS02G0116800 PROTEIN 74 463 - -
Phco1g00482 470 CDD UDM1_RNF168_RNF169-like 389 446 - -
Phco1g00482 470 Coils Coil 429 449 - -
Phco1g00482 470 Coils Coil 385 412 - -
Phco1g00482 470 MobiDBLite consensus disorder prediction 64 96 - -
Phco1g00482 470 Pfam Remorin, C-terminal region 355 451 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00482 Phco-Chr1 3825970 3829993 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00482 1 3825970 3829993 Phco1g00482 1 3825970 3829993 ECH
Phco7g03068 7 49192465 49195122 Phco1g00482 1 3825970 3829993 PCT