Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00478 ATGGAGAATCGGAAGACATCGACATACTACGAGAACAGAGCGGTGCAGTTCGGGGTAGTCAGCACCGAGTGGCTCGCTCAGGCTCAGTCCGCCACCGTCCACCGCCCCCCTTCTCCTCCTCTTCCTGCTCCCCATAATGACGCCGACAAACCCTTCTCCGTCATCCAGGAGTTCGACACCTGGCGCAAGCACCCGGATTTGGCGGAGGCAGTCGCCGCCATTCGCGCTTTGGCCGCCGTCATCCGCTCCAGCAAGGCCACCACCATGATGCAGCTCGAAATCCAACTCAAAAGCGCCTCCGATTCCCTCAAATGTTGGGATACAACCTCTATCTCCTTAACCGCCGCCTGCGATCTCTTCATGAGATACGTCACCAGGACCTCCGCTCTCGAATACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCCGATAAGTTCGGCGAAATCTCCTTCAAGGCTCGCGAAATCATTGCAATGCTGAGCCAGGATTTTATATTCGACGGTTGCACAATTCTTGTTCACGGTTTCTCCAGAGTCGTACTGCAGATTCTCAAACTCGCCGCACAGAATAACAAGCTCTTTAGAGTCTTCTGCACAGAGGGGAGACCGGATAGAACGGGTTTGCGGCTGTCCAATGAGCTGGCGAAGCTTGATGTGCCTGTGAAGCTTGTTATAGACTCTGCAGTGGCGTATACTATGGATGAGGTTGACATGGTGTTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGGACTTACCAAATTGCAATGGTCGCTAAGAGCATGAACAAGCCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGATTTTACCCTCTGGACCAAAAGGATTTGGCCCCTGCCTTACGCCCTGTTGATTTTGGTGTGCCTGTTCCATCCAAGGTTGAAGTTGAATGCTCTGCGCGGGATTATACTCCTCCTCAGTATCTCACTCTGCTTTTCACTGACTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATATTTGTAG 1056 0.5142 MENRKTSTYYENRAVQFGVVSTEWLAQAQSATVHRPPSPPLPAPHNDADKPFSVIQEFDTWRKHPDLAEAVAAIRALAAVIRSSKATTMMQLEIQLKSASDSLKCWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERADKFGEISFKAREIIAMLSQDFIFDGCTILVHGFSRVVLQILKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMNKPVYVAAESYKFARFYPLDQKDLAPALRPVDFGVPVPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00478 351 Pfam Initiation factor 2 subunit family 65 339 IPR000649 GO:0044237
Phco1g00478 351 Gene3D - 155 351 IPR042529 -
Phco1g00478 351 SUPERFAMILY NagB/RpiA/CoA transferase-like 63 350 IPR037171 -
Phco1g00478 351 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 19 351 - -
Phco1g00478 351 Gene3D - 50 152 IPR042528 -
Phco1g00478 351 FunFam Translation initiation factor eIF-2B subunit alpha 50 152 - -
Phco1g00478 351 FunFam Translation initiation factor eIF-2B subunit alpha 155 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00478 Phco-Chr1 3791881 3793721 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00478 1 3791881 3793721 Phco1g00478 1 3791881 3793721 ECH
Phco7g03071 7 49199454 49201732 Phco1g00478 1 3791881 3793721 PCT