Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00458 ATGGGCAGATTTGGTGATTCGTTTAACGTGGATTTGGCTGCTGCAGTGAACAATCTCTTCCATATTCCTGAAACCGTGGAAAAGATCATTTTTCCTTCTTCTCGTGCCCCTGACCACCAGGACAGCAGAGGGGTTTCTAGCATCATTCCAGTGGACATTTTGGACGCTCCGAAGGAATTTATATTCTTTATGGATGTTCCTGGTCTCTCCAAGTCTGAAATTCAGGTGACAGTTGAAGATGAGAACACACTTGTAATACGAAGCAATGGAAAGAGGAAACGCCATGACGGAGATGATGAAGGGTGCAAGTATCTCAGGCTGGAGAGGAGAGGGCCTCAGAATTTGCTGAGGAAGTTCCGTTTACCTGAGACTGCCAATGTGTCTGCAATCACTGCTAAATGCGAAAATGGGGTTCTGACTGTAGTTGTCGGGAAGCACCCTCCTCCAAAATTCAAATCCGTTGAAAGAAATCCACTTGACATTTATGAACTTAATACATTAAAATTAGATTCTTGA 516 0.438 MGRFGDSFNVDLAAAVNNLFHIPETVEKIIFPSSRAPDHQDSRGVSSIIPVDILDAPKEFIFFMDVPGLSKSEIQVTVEDENTLVIRSNGKRKRHDGDDEGCKYLRLERRGPQNLLRKFRLPETANVSAITAKCENGVLTVVVGKHPPPKFKSVERNPLDIYELNTLKLDS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00458 171 FunFam 17.4 kDa class III heat shock protein isoform A 9 157 - -
Phco1g00458 171 SUPERFAMILY HSP20-like chaperones 33 154 IPR008978 -
Phco1g00458 171 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 162 IPR002068 -
Phco1g00458 171 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 152 IPR031107 -
Phco1g00458 171 Gene3D - 11 155 IPR008978 -
Phco1g00458 171 Pfam Hsp20/alpha crystallin family 52 152 IPR002068 -
Phco1g00458 171 CDD ACD_sHsps-like 52 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00458 Phco-Chr1 3619533 3620515 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00458 1 3619533 3620515 Phco1g00458 1 3619533 3620515 ECH