Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00424 ATGGCTGACTATTTCTCCGGCTCCGTCGAATTCGGACTCAACCTATCGAAGCGAGTTTACTACGGCAGAGGATCGGCTCCACCGTCGGTTCCGTCGATGTCCAGGTCGCCGGAGGGATTCCTCCCGACGGCGCCGATGTGCTACGCGGTGATATCCGATCCGGAGAAGGTCGAGAATCCGGACATTCGGAGTTACCAGCCCTACGTGCTCGGCCAGTGCGATCCTCCGGCGCTGATACCGCTTGAGCTTCACGGCGTCGCCATGGAAGTGGAGTGCTCCTTGGACACGGCGTTTGTAACGGTCACCGGAAAGTGGCGCGTGCATTGCGTGACCGGAAGTAGTTCGTGTGATTGCCAGGTTGCCATACCCATGGGAGAACAGGGTTCACTTCTAGGTCTAGAGGTTGATGGTTCTGGAAGAACTTATCACACTGAATTGATCTCCCTGAAGGATGAAAAGGATAAGGATAAAGTGGCCAAAGCTAAAGATGGATACTTCTTGAAAAGCCATATATACACCGTTAAGATTCCACAGTTGAGGGGAGGCTCCGTGTTCTCAACTAAGATCAGATGGTCCCAGAAAATATTATTTCATGATGGCCAGTTATCTCTCTGTGTCCCTTTCAGCTTTCCGTCATACGTCAACCCAGCTGGAAAAAGAATTTCTAAAAAGGAGAAGATATTTTTGAAAGTGAATTCTGGTTCTGCAACGGAAGTGTTATGCAAAACCACCAGTCATCCCCTGAAGCAACTACTGCGCCAAGCTGGCAAATTAAATTTATCGTATGAAGCAGAAGTGTCAGCATGGTCAAGTACAGACTTCAATTTCTCGTACTCTTTTTCTTCAAATGACATATTTGGAGCTGTTCTCTTGCAATCTCCATTCCTGCGTGATTTTGACGAAAGAGAGATATTTTGTTTGTATCTTTACGCCGGAAACGGGCACGCCAGAAAGGTTTTTAAAAAGGATGTGGTGTTTATAGTAGATATAAGCGCAAGCATGAAGGGAACTCCTCTTGATAACACAAAGAATGCCCTACTGACATCGCTCTCTCAATTAAATGCACAAGATACATTTAACATTATTGCTTTCAATGGAGCGCTCTACTTATTTTCGTCATCAATGGAATCAGCTACAGAGGAAGCAATTTTAAATGCTACGAAGTGGGTTGACACTAATTTTATTGCTAATGGTGACACTAATATCATGCTTCCCTTAACACAGGCAATGAAGCATCTTGAGAAATCAACTGATGCGGTCCCTCTTATTTTTCTCGTTACTGATGGGGCTGTTGAGGATGAGAGAGAGATATGCAATTTTGTGAAAAGCTATGTCTCAAGTGGGCAATCAGTTCCAACACCGCGTATATGTACCCTTGGCATAGGTTTATATTGCAATCACTACTTCCTGCAAATGCTAGCACAAATTGGGAGGGGACATTATGATTGTGCCCATGATTTAGATTCAATTGAATTTAGAATGCAAAGGCTATTCAGTACAGCTTCATCAGTTATAGTTGCTGATGTAACAATCGAAAGTTTAGAAAGTCTCGATTCACATGAGTTATTCCCGTCTCATATACAAGATATATCATCTGGAAGTCCGTTGATCCTATCAGGCAGATACAGTGGAACTTTCCCTGAATTAGTTAAAGTCACTGGTACTTTGGCAGATATGACTAACTTCGCAGTAGACCTTAAAGTGAAAAGAGAGAAGGATATACAGCTTAGTAACGTCCTTTCAAAGAGACATATAGACATGGTCACTGCACAAGCCTGGTTATTGAAAAGTGAAGAGCTGGAGGAGAAGGTTACAAAAATGAGTATTCAAAACAAAGTCCTGTCAGAGTATACCTGCATGAACATGGTTCTTGAACAGAGCGATGAAGGGAAGAAACCACCGGAACAATTTCTGTTAAAAAAGGCATACAAGAAACTTAGTTTCCAGCAGTTGGAGTTCAACATGAAGAAGTTATTCCTTGGCGGGCTGAGTCTTGGATTTGGTGACTCTAAAGCAACTGCTGAGAATTTGCCACCAGCTATAAAGGAAGCAAAACCACCTGAAGGACTACTGGGGAAGGCTGCTTCCACCTGTTGTAGCCGATTGACTGACAACTGTTGTGGCATGTGTCTGCTACAGGCTTGCACTTTTGTGAATGACCAGTGCACCATTGTTTGCACTCAACTTTGTGCAGCCCTGGCCTGTTTTGAGTTAATCAAATGCTGTATTGAGCTCTGCGAGTGTGATTGTTTGTAG 2256 0.4393 MADYFSGSVEFGLNLSKRVYYGRGSAPPSVPSMSRSPEGFLPTAPMCYAVISDPEKVENPDIRSYQPYVLGQCDPPALIPLELHGVAMEVECSLDTAFVTVTGKWRVHCVTGSSSCDCQVAIPMGEQGSLLGLEVDGSGRTYHTELISLKDEKDKDKVAKAKDGYFLKSHIYTVKIPQLRGGSVFSTKIRWSQKILFHDGQLSLCVPFSFPSYVNPAGKRISKKEKIFLKVNSGSATEVLCKTTSHPLKQLLRQAGKLNLSYEAEVSAWSSTDFNFSYSFSSNDIFGAVLLQSPFLRDFDEREIFCLYLYAGNGHARKVFKKDVVFIVDISASMKGTPLDNTKNALLTSLSQLNAQDTFNIIAFNGALYLFSSSMESATEEAILNATKWVDTNFIANGDTNIMLPLTQAMKHLEKSTDAVPLIFLVTDGAVEDEREICNFVKSYVSSGQSVPTPRICTLGIGLYCNHYFLQMLAQIGRGHYDCAHDLDSIEFRMQRLFSTASSVIVADVTIESLESLDSHELFPSHIQDISSGSPLILSGRYSGTFPELVKVTGTLADMTNFAVDLKVKREKDIQLSNVLSKRHIDMVTAQAWLLKSEELEEKVTKMSIQNKVLSEYTCMNMVLEQSDEGKKPPEQFLLKKAYKKLSFQQLEFNMKKLFLGGLSLGFGDSKATAENLPPAIKEAKPPEGLLGKAASTCCSRLTDNCCGMCLLQACTFVNDQCTIVCTQLCAALACFELIKCCIELCECDCL 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00424 751 SMART VWA_4 321 495 IPR002035 -
Phco1g00424 751 Gene3D von Willebrand factor, type A domain 321 501 IPR036465 -
Phco1g00424 751 ProSiteProfiles VWFA domain profile. 323 497 IPR002035 -
Phco1g00424 751 SUPERFAMILY vWA-like 322 494 IPR036465 -
Phco1g00424 751 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 3 749 - -
Phco1g00424 751 CDD vWA_interalpha_trypsin_inhibitor 320 496 - -
Phco1g00424 751 Pfam von Willebrand factor type A domain 322 483 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00424 Phco-Chr1 3354094 3364862 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00424 1 3354094 3364862 Phco1g00424 1 3354094 3364862 ECH