Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00423 ATGATTTTTTTCCTCTCTCTCTGGGATTTGTGTTGTTATAGGGATAGTAAAATAATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCCCTTCTGTATTATACATTGAATCGGAAATTGCAGACTCAGGATGAAATAGATGAAGATGTTGAAGAAAGTGGAAGTGAAACGCCCACTGATACGCCATTAGGCAGTGCTCGTGTTTCCCATCGGTTAATCCAAGCCCCTGGTACGTGGTTAGAGACAATTTCAACGTTGTCAGAGACTCTCAGGTTCACGTACTCGGAGACACTTGGGAAATGGCCTATTGGGGATTTGGCGTTTGGTATCAGCTTTCTGCTCAAAAGGCAGGGGAACTATCAAGTTGACAGTGAATTTTGTGGTAATGATAGTGTACAGCTGAAAGGATCTGAGATTACTGCTGAACTTAAGTATCTCTTAAAATTGTTGACCCTGTGCTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGAAGAAACTGGCTACGATGAAGAAAATGTTCTCCTTCGGGAAGCCAAAGCAGGAATTTTGAAACCAGCTTTTACAATAATAGCTGATCATGAGATGAGATGCCTTTTGCTATTGATTCGTGGCACACATAGTATCAAAGATACTCTAACTGCTGTTACAGGAAATGTGGTTCCATTCCATCACACTGTTGTTCATCAAGGGGGTGTTAGAGATTTGGTTTTAGGTTATGCCCATTGTGGAATGGTTGCTGCTGCTCGATGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTGAAGCACTTGGCCAATACCCTGATTATAAAGTCAAGATTGTTGGGCACTCTTTGGGTGGAGGTACTGCAGCAATTCTAACTTATGTGTTGAGAGAGAGAAAGGAACTGTCTGTCGCTACATGTGTTACCTTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCGGGCGTTAGTTTCATCACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTGGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAGCATACAAGAATACTTAGTACAGTCTATCGCTCTGCCTCAGCGTTAGGTTCTCGCCTCCCATCGATAGCCACGGCTAGAGCAAAAGTTGCTGGGGCTGGGGCTATTTTGCAGCCTGTTTCTAATGGTACCCAGGTTGTGATGAAGAGAGCCAAGAGTATGGCTCAGGCAGCATGGGCACGTCCAAACCTTAATTTGTCCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCTTGAGTGCTTATTCAAACTCCAAAGACGGGGAAGGTTCGCCTAGATCTTCCTCTACCAACACTGACAGTTCTGATGCACTTCTTGGTTCCCCAAAGAAGGCAATTAATGCAAAGAATATGAACCTTCCTGTATCTTCGTCTATAGAAGAGTGGTCTTCTGAGATTGAATGTGGCAATGAAAGTAGTTCTGATACTGAGGTGGGTGTTGATCATGGTGACCATCAGAACGTGATGGACCATGGCAGGTATGATGATCAAATGAGTGAAGTGGAGTTGTGGCATCAACTGGAGAATGAGCTGTATGACGGTCCTGAGGTTGAGGAGACTGATGTTGTAAAGGAGATAAGGGAAGAGGAAGCAGCTGTAGCGGACGAAGTAGAGCAAGCCCAGAGTTCTGTACCAGAAATAAAAGAAGTCTACAGATTTTTCCCTCCAGGAAAGATAATGCATATTGTTACACTTCGTTCTGAGACGGAGGATGAAAATGATGATAGCCCAACCTATGCAAGTTCAGACAGTAGCGAGCTAGATGAGACTAAGATTGGGATTTTTCTAACTTCCAGGTCTCTGTATAGTAAACTTAGACTTTCACAGAGAATGATCAGTGATCACTTCATGCCAGTTTATAGAAGGCAGATTGAAAGGCTAATAAAAGAACTTGAGCAAGAAGCTACTGAAGACCATGTTACACAAGAGGTGGTGTTATAG 2034 0.4395 MIFFLSLWDLCCYRDSKIMATATMATAAGAAALLYYTLNRKLQTQDEIDEDVEESGSETPTDTPLGSARVSHRLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYQVDSEFCGNDSVQLKGSEITAELKYLLKLLTLCWHFSKKPFPLFLEETGYDEENVLLREAKAGILKPAFTIIADHEMRCLLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVRDLVLGYAHCGMVAAARWIAKLATPCLLEALGQYPDYKVKIVGHSLGGGTAAILTYVLRERKELSVATCVTFAPAACMTWELAESGVSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEHTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWARPNLNLSSWSCMGPRRRALSAYSNSKDGEGSPRSSSTNTDSSDALLGSPKKAINAKNMNLPVSSSIEEWSSEIECGNESSSDTEVGVDHGDHQNVMDHGRYDDQMSEVELWHQLENELYDGPEVEETDVVKEIREEEAAVADEVEQAQSSVPEIKEVYRFFPPGKIMHIVTLRSETEDENDDSPTYASSDSSELDETKIGIFLTSRSLYSKLRLSQRMISDHFMPVYRRQIERLIKELEQEATEDHVTQEVVL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00423 677 Pfam Lipase 3 N-terminal region 69 149 IPR005592 GO:0016042
Phco1g00423 677 Coils Coil 648 668 - -
Phco1g00423 677 SUPERFAMILY alpha/beta-Hydrolases 170 341 IPR029058 -
Phco1g00423 677 MobiDBLite consensus disorder prediction 445 476 - -
Phco1g00423 677 Coils Coil 554 574 - -
Phco1g00423 677 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 24 667 - -
Phco1g00423 677 MobiDBLite consensus disorder prediction 448 469 - -
Phco1g00423 677 Pfam Lipase (class 3) 204 341 IPR002921 GO:0006629
Phco1g00423 677 CDD Lipase_3 196 340 - -
Phco1g00423 677 Gene3D alpha/beta hydrolase 169 376 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00423 Phco-Chr1 3335968 3340975 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00423 1 3335968 3340975 Phco1g00423 1 3335968 3340975 ECH