Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00420 ATGAAAGCGCCAAATGCTTTTTTTGGTGCAAAACGTAGAAGTTTTCATGGGGTTCTTAACGCTTTCTGTGCCGTGGTTTTGTTTTTCTTCTTTTACAATCGTAAGGACATCATTCGCAACCCGATTCTCAGGCAATATTCCCATTTTGCTAACCACGGGTTGCCTCAAAATGCTATTTTTAGAGATGGGTCTTCTGTGATTCACCGTCGAATGGTTGAAATCAGCGCCAACACTTCAAGTGTAGCCGGTGAAAATGATTTAGGTGTGAATAATTCTGAATTCTGTTCTGGGGTGGTCAACCATGATGGTTATGCTAGTTCCTGTGAATTCTTAAAGGTTAATCCACAGTGTTCTTCTGATGGATATCTTGATTACTTGAAATTTTTCTACTGTACGTGTCAGGGCTTTAGAGTGTTTGGTTATCTAGGGTTGGGTGTATGGCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCTGCGGACTACTTTTGCCCTTCTCTTGAGAATTTGTCAAGGCTCTTGAAATTGCCTCCAACTGTGGCCGGGGTTGTGTTGCTTCCACTTGGGAATGGAGCACCTGATGTGTTTGCTAGTATAGCTTCCTTTGTGGGTGCTGAAAGTGGTGAGGTTGGTCTTAACAGTGTGTTGGGTGGTGCTCTTTTTGTTACCACTATTGTTGTTGGAACTGTGTCACTATGCGTTGCGGAGAAGGAGATTGAAATTGATCTAAGATGCTTTATAAGGGATGTGAGTTTCTTCCTCCTGACTCTGTTTTCGCTGCTTTTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGGCGACCATTGCTTTTGTATCCATTTATTTCGTGTATGCATTCATTGTTGCTGCCAATGAGATATTGAGGAAACATGCACAGAGATTGAAATTAGATGTTGTCACACCATTGCTTCCTGTCCAGGGAAGTGTGTTCTCTCTAGGTGTGGAAGAGGATATTTCGATCTATAGCTCTTTGCTTGAAGACACTGAAAGCGATCCTCCCCGCCTCCCTCCATCGTTACCCCAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAACCATACAAGCAAAATCAACTTTTTGGATGATGAAAGGCCTCCCTGGGGATGGACTGATGGGTCTGTGGAGAACACCAGGCTGTCATTTTCGGTTTCAAAACTTTTTCTGCTGATGGAGATTCCACTGGCTATTCCTAGGCGTTTCACAATTCCAATGGTCAATGAAGAAGTATGGTCAAAACCTTATGCTGTGATCAGTGCTTCATTGGCTCCCGTTCTCCTCGGCGTTTTGTTTAGTACCCGAGATAGTGTGAGTAATCAGGGCGTTATACTTTCTTATTGTGTTGGTGTTGCTCTTGGATGTACATTTGGTATTCTCGCTTATAAATACACTGTATCTAATCATCCGCCACCTCAATTTTTACTTGCTTGGGTTCTTGGAGGATTCATCATGAGCATAGTGTGGTTCTACATAATAGCAAACGAGCTTGTGGCTCTATTGGTAGGATTTGGTGTAATTTTCGGAATTAATCCATCCATCTTGGGGTTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATATTGCATTGGCATTGGATGGAGAGGATGGAGTTCAGATTGCTATATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGAATCTCGCTGCTGCTTGGGGCCTGGTCTAAGAAACCCTCTTTGTACGTGGTGCCTGAAGACAGTAGCTTATTTTACACCATGGGATTTCTGATCGCAGGACTGCTATGGGCGCTTGTTTTGCTACCTGCCAAGAACATGCATCCTAACAGAACATTAGGAATGGGTCTCATCACCCTTTATGTCATATTTCTTTCTTTCAGGATATGCACTGCAATGGGATTTATAACAGTTGCTGGTTTAAGTTGA 1953 0.4286 MKAPNAFFGAKRRSFHGVLNAFCAVVLFFFFYNRKDIIRNPILRQYSHFANHGLPQNAIFRDGSSVIHRRMVEISANTSSVAGENDLGVNNSEFCSGVVNHDGYASSCEFLKVNPQCSSDGYLDYLKFFYCTCQGFRVFGYLGLGVWLAALFYLLGNTAADYFCPSLENLSRLLKLPPTVAGVVLLPLGNGAPDVFASIASFVGAESGEVGLNSVLGGALFVTTIVVGTVSLCVAEKEIEIDLRCFIRDVSFFLLTLFSLLLILVVGKVGVGATIAFVSIYFVYAFIVAANEILRKHAQRLKLDVVTPLLPVQGSVFSLGVEEDISIYSSLLEDTESDPPRLPPSLPQWMWSSNVAIYSNHTSKINFLDDERPPWGWTDGSVENTRLSFSVSKLFLLMEIPLAIPRRFTIPMVNEEVWSKPYAVISASLAPVLLGVLFSTRDSVSNQGVILSYCVGVALGCTFGILAYKYTVSNHPPPQFLLAWVLGGFIMSIVWFYIIANELVALLVGFGVIFGINPSILGLTVLAWGNSMGDLMSNIALALDGEDGVQIAISGCYAGPMFNTLVGLGISLLLGAWSKKPSLYVVPEDSSLFYTMGFLIAGLLWALVLLPAKNMHPNRTLGMGLITLYVIFLSFRICTAMGFITVAGLS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00420 650 Pfam Sodium/calcium exchanger protein 485 637 IPR004837 GO:0016020|GO:0055085
Phco1g00420 650 Pfam Sodium/calcium exchanger protein 146 288 IPR004837 GO:0016020|GO:0055085
Phco1g00420 650 Gene3D - 416 638 IPR044880 -
Phco1g00420 650 Gene3D - 176 309 IPR044880 -
Phco1g00420 650 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 22 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00420 Phco-Chr1 3312573 3314525 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00420 1 3312573 3314525 Phco1g00420 1 3312573 3314525 ECH