Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00397 ATGCAACATGGCGCTTCCTTCCCCTTCTTCCTCACTGTTTTCCCTTGCACTAGACTAATTGATTACACACGAAGTGCGGTGGCAACGAAAGAGTTGGAGGACCGCGTATGTCCTCGCTTAGAATCGCGGCTTATGGAATTGGTTGGTTCTCTGCAAAAGACCTCGAGTGATTCACTTAAAGATCATCAATTTCAAGAATTCGAAAAGAAACATGCTGATGAGAGTGTTCAGTCCGGAGGGGAACGCCATCCCTCTTCTTCTTCTTCTTATTCTTGCGAAATATTGGACTTGTTCCATGGAGGGGTTAAATGTGGTGCCAGAAAGCAGGCTGTCTGGGGATTCTTTCTGGGTGCAAGTGATAGACTGGGAGAGATTAGGTCATTGGAGGCACTGCACAAACTTTTTGAGCAGTTTCTTAGAGCTTTTATGGGCATACTTCATGTTCCTCTGCCCAACAGGAGTTCCCATCAGTCTTCTGTTCAGGAGAAAACCTGCTGTGTGGATGATTGTTCAAAGAGGAGAAACAGGGATCATTGTGAAGAAAGCGCATCACATAACAGTGAACTGAGGACAATGTCTGCCGAATCGCCAAGTTCTGTTCGTAAAGTGGTTATTCATCTCAGAGCCACCGGTGATGCTCCTATTCTCAAGCAATCTAAGTTCAAGATAGCAGGAACTGATAAATTCGCTAAAGTGATAGATTTTCTTCGCCGGCAGCTCCACAGGGAGACATTGTTTGTGTATGTCAATAGTGCTTTTTCACCAAACCCTGATGAATTGGTCATTGATCTGTTTAATAATTTTGGTTTTGATGGCAAACTGGTGGTGAACTACGCCTGCTCCATGGCGTGGGGCTAA 858 0.4499 MQHGASFPFFLTVFPCTRLIDYTRSAVATKELEDRVCPRLESRLMELVGSLQKTSSDSLKDHQFQEFEKKHADESVQSGGERHPSSSSSYSCEILDLFHGGVKCGARKQAVWGFFLGASDRLGEIRSLEALHKLFEQFLRAFMGILHVPLPNRSSHQSSVQEKTCCVDDCSKRRNRDHCEESASHNSELRTMSAESPSSVRKVVIHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00397 285 CDD Ubl_ATG12 202 284 - -
Phco1g00397 285 SUPERFAMILY Ubiquitin-like 201 284 IPR029071 -
Phco1g00397 285 PANTHER AUTOPHAGY PROTEIN 12 191 285 IPR007242 GO:0000045|GO:0005737
Phco1g00397 285 Gene3D - 196 285 - -
Phco1g00397 285 FunFam Ubiquitin-like protein ATG12 196 285 - -
Phco1g00397 285 Pfam Ubiquitin-like autophagy protein Apg12 202 285 IPR007242 GO:0000045|GO:0005737
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco1g00397 Phco-Chr1 3124598 3136451 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00397 1 3124598 3136451 Phco1g00397 1 3124598 3136451 ECH