Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00389 ATGGAAACTGTGGTTGGAATTGAGGATAATGATGATGGGAAGTTTGAAGATAGTGGGTTGGATAGAAGCAGTTCTGCTCTCTCTTCACCGAAGCAAATTTCTAACCCAATTGTATACAAGCTTGTTCGGGTTGAAGGTGATGGAAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTGGGAGATTTTATTGAGTATGAAAACAGTGAAATGCATGTTGTCGCTGACACTGGACAGAGTTTAGAATGCATATCGATTGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCTGAAGGCTCTGCAGAGGCTGATCTGGGGAAACTAAATGCAAAATTACAGTACATTGAGCAGATTTTGCAAAAGGTCAAAGAAGAGGAGAAACAACGCATATCATGTGGATCACCTGTTCATTCTCATGTAAATGTAGACAGCCAGTGTTCAGCTGATAAATGTCCTGTCATGGATGGGAAGGTTCAATCTGCAACTCCCTACCAGGAAAATCCTTCTATCGCATCGAGTTTAAATTATACTCATAGCAATCAATCTGGGAGTATGGATCAGTGTTCTAGACCTTCAGAAGGAGTAATAGAAAGTGGGTCATCTGCTTCTGCTATCCATTCCAATTTGAAGCCTGACCTTTCAATGTCAGATGGAGAAATATGCTTGGACAAGCTATCAATCAGAGAACTTCATGAACTGTTTAAGGTAACTTTTGGTCGAGAAACTACTGTGAAAGACAAACAGTGGCTGAAAAGGAGGATTGCCATGAGTTTAACCAACTCTTGTGATGTTTCAGCAACAAATTTTATTATTAAAGATAACCAAATAGTTAGAAAATTTGTAGAAGAAAGTTCTGGAAATATGAATATTTCATCCTTAATTTCTTTGGAAAATATGACTGAAGAAGAGGATATCGACTTGAAGGATTCATCTGCTGTAAATGCTTGTGGAATTGATGATAACCAAGTTGTTTCTGAAATAAGACTGAGAAATCAAAATATAGAATATGGATTGGAAGATGAGAATAATGAGACAGAACAAAGAGCTGCAAAAAGAATTCGGAGACCTACGAAAAGATATATTGAAGAGCTCTCAGAAAATGAATCTAGAGAGCACAATCCTAGGTTGCCAATTTCTAATAAAAACATGGGACTTGGACATGTTTCTTCAACATCATTTGTTAGGCCTGCTAGAAATACTTTTTCAGAGGTGAGAACATATGGCATGAGGTTTGACTCTCTTGGAGGTTCTGATGTCCAAATTCCTTGTGTGTCTTGGATTCGGAGAAGTCGTCCAAGGAAAGATATGGCATCTCTTATGAAATTCCATCCAACTGCCACGAGTGAGACTGTAAAATTGAGTGATAAGCTCATTGAGCATAGTTCTGATGCTGTTGGTGAGATTCCAGATAAAGTTTTCAAGCCTAGAATGCCTGCTAAGTTTCATCAATCATCTTCTTCTGAACCTGAGAAAGAGAAGCAGTGTCCAGTAGTAGACACAATTGAGCCACGGCAGGAATTGAGGCCAAAATGGGCAGATCCATCTGGCCATACTTCAGATGACAACATAGTTACTGTTCCCACTGCAAAAGGAGGGATGAGGAGGAAGCATCATCGGGCATGGACTCTTGTTGAGGTCATAAAATTGGTTGAAGGCGTGTCACGGTGTGGAGCAGGGAGGTGGTCTGAAATCAAACGGCTCTCCTTTGCATCGTACTCATATCGTACATCTGTTGATCTTAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCAATGACACCTGCACCTGCTGATGAGGGGATAAATTCGCGGAAGCATGGTACGGCACCGATTCCTGAGAAAATTTTACTACGTGTAAGAGAGCTTGCTGAGATGAATTCTCAGGTTCCTCCAAACATTAGCTCAAACAAGGTAGCAGCTGGTGCAGGGAGTGTGCATGAAGGTAGATCAGGGTACTTGTAA 1977 0.4082 METVVGIEDNDDGKFEDSGLDRSSSALSSPKQISNPIVYKLVRVEGDGRLVPATDDEVMEVGDFIEYENSEMHVVADTGQSLECISIERSSSGKLRLECSEGSAEADLGKLNAKLQYIEQILQKVKEEEKQRISCGSPVHSHVNVDSQCSADKCPVMDGKVQSATPYQENPSIASSLNYTHSNQSGSMDQCSRPSEGVIESGSSASAIHSNLKPDLSMSDGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATNFIIKDNQIVRKFVEESSGNMNISSLISLENMTEEEDIDLKDSSAVNACGIDDNQVVSEIRLRNQNIEYGLEDENNETEQRAAKRIRRPTKRYIEELSENESREHNPRLPISNKNMGLGHVSSTSFVRPARNTFSEVRTYGMRFDSLGGSDVQIPCVSWIRRSRPRKDMASLMKFHPTATSETVKLSDKLIEHSSDAVGEIPDKVFKPRMPAKFHQSSSSEPEKEKQCPVVDTIEPRQELRPKWADPSGHTSDDNIVTVPTAKGGMRRKHHRAWTLVEVIKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAMTPAPADEGINSRKHGTAPIPEKILLRVRELAEMNSQVPPNISSNKVAAGAGSVHEGRSGYL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00389 658 SMART sant 540 593 IPR001005 -
Phco1g00389 658 MobiDBLite consensus disorder prediction 367 386 - -
Phco1g00389 658 Pfam Myb-like DNA-binding domain 543 591 IPR001005 -
Phco1g00389 658 Coils Coil 108 128 - -
Phco1g00389 658 Gene3D - 531 641 - -
Phco1g00389 658 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 23 640 - -
Phco1g00389 658 MobiDBLite consensus disorder prediction 488 518 - -
Phco1g00389 658 SUPERFAMILY Homeodomain-like 542 601 IPR009057 -
Phco1g00389 658 MobiDBLite consensus disorder prediction 481 526 - -
Phco1g00389 658 CDD SANT_TRF 542 592 - -
Phco1g00389 658 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 536 595 IPR017930 -
Phco1g00389 658 ProSiteProfiles Myb-like domain profile. 544 591 IPR001005 -
Phco1g00389 658 MobiDBLite consensus disorder prediction 179 200 - -
Phco1g00389 658 MobiDBLite consensus disorder prediction 1 30 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00389 1 3036358 3042029 Phco1g00389 1 3036358 3042029 ECH