Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00375 ATGGACAAGTGGGACAATAAACCATCAAGAAAACAGCACCACAGAGAAAACCCTTCTTTCTCTTCCACTTTACTTGACGTTATCTACCGTTCAATCGACGAAGACCAAACGGAGGAGAAGGAAGACGAGCAGCTTATCTTCTACAGAGAAACCATGAGGAAGCAGAAGCAGAGCAATTGTTTCAGGGAGGACAAAACTGAAGCTGAGAAGCACAACTCTCGCAGGGCCAGGAAGGTGGAGAATTGGATGGAGAAGAGAACCTGCGAGAAAGTTCTAATGGGGAGAAACTCTTTGACGGAATTTGAAAGAAGAACGCGAAGCAATTCGATTTCAAACACTCTCTCCATGTATTCAAGCTCAACCTCTTCCTCCGAGTCAAGCTCTGTTGGGGGGTTCTCTTCTTCAGAGTCAGAGTCCTTCTATGGAGTGCAAAGGCCAAAGCCAATTAAAATCAGTGTTTCTGATAAAACCAAAACCAAAACCAACTTTGATGCCGCACTTCACGATCACAACTTCAGGAGCCACTCTTCTCAAACCCAAAAGCCAAAGCATGAGAATGGTTTTGGCAAAACCAAGTCCAAAGCCTTGAAAATCCTTTATGGTGAGTTGAAGAAAGCAAAGCAACCAATTTCACCAGGTGCAAGACTCGCCAGCTTTCTCAACTCTCTCTTCACTTCAAGTGGAAATGCCAAAAAAGCAAAGGTTTCAACAACAACTACAACAACGACATCTACTTGTCGTCCTGTTCTGTTTCCGGTTGCAACAAATCGTTCCGACGATACTAAATCAGCGGCACAACAGCCTGGTTCCACATGCTCATCAGCATCTTCTTTTTCAAGGTCTTGTTTGAGCAAAACCCCTTCTTCAAGATCAGGTGCCAAAAGGTCTGTAAGGTTTTGCCCGGTGAGTGTGATAGTGGATGAAGATTGTAGGCCTTGTGGGCACAAGAATGTTTATGAGGGTGAAGAAGGTTTGGTGGGTTCCAATGGAAAGAACAGGAGTGAAGAATTGAGGCTGCATGTCATGCAGGAGAGTCGCAGGGTGGAGGAGTTAGCAAGAGACTTACTGAAGAATTATCAGAAAAAAAGTGAAGTGGAGTTTGATGCTGTTATGCATTACGAAGATGAAGAAGAAGAAGAAGATGATGATGATGTAGCAAGTTGTTCAAGTTCTGATCTCTTTGAGTTGGATAATCTATCAGCAATCGGGATTGAGAGGTACAGGGAAGAGTTACCTGTGTATGAAACTACCCATTTCAATACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAA 1296 0.4367 MDKWDNKPSRKQHHRENPSFSSTLLDVIYRSIDEDQTEEKEDEQLIFYRETMRKQKQSNCFREDKTEAEKHNSRRARKVENWMEKRTCEKVLMGRNSLTEFERRTRSNSISNTLSMYSSSTSSSESSSVGGFSSSESESFYGVQRPKPIKISVSDKTKTKTNFDAALHDHNFRSHSSQTQKPKHENGFGKTKSKALKILYGELKKAKQPISPGARLASFLNSLFTSSGNAKKAKVSTTTTTTTSTCRPVLFPVATNRSDDTKSAAQQPGSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNVYEGEEGLVGSNGKNRSEELRLHVMQESRRVEELARDLLKNYQKKSEVEFDAVMHYEDEEEEEDDDDVASCSSSDLFELDNLSAIGIERYREELPVYETTHFNTNRAIANGFIL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00375 431 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 9 431 IPR039621 GO:0009734
Phco1g00375 431 MobiDBLite consensus disorder prediction 57 78 - -
Phco1g00375 431 MobiDBLite consensus disorder prediction 1 17 - -
Phco1g00375 431 MobiDBLite consensus disorder prediction 1 22 - -
Phco1g00375 431 MobiDBLite consensus disorder prediction 113 139 - -
Phco1g00375 431 MobiDBLite consensus disorder prediction 255 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00375 Phco-Chr1 2911726 2913021 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01925 8 20383796 20384950 Phco1g00375 1 2911726 2913021 ECH
Phco7g00621 7 4704554 4706235 Phco1g00375 1 2911726 2913021 ECH
Phco1g00375 1 2911726 2913021 Phco1g00375 1 2911726 2913021 ECH
Phco1g00375 1 2911726 2913021 Phco7g00621 7 4704554 4706235 ECH
Phco1g00375 1 2911726 2913021 Phco2g00460 2 4122858 4123994 ECH