Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00372 ATGGTCCCTGGTTCCAGAACGGAGAGTGGCACTGGTACCCATTTGCTCTCGGCGAGAGTGCGCAAAACCATTCAATCCATCAAGGAAATCGTGGGGAATCATTCTGATGCTGATATCTATGTTGCCCTCAAGGAAACCAACATGGATCCTAACGAAACCACTCAGAAATTGCTCAACCAAGATCCATTTCATGAGGTGAAGAGAAGGAGAGACCGAAAGAAGGAGCCACAGAATGTTGGGAACAATGGTTCAGCTGACTCACGACGGCCATCAGAGAATAATAGTGGTCAAGGAGTGAAATTTCACACCCCTTCTGAACGCAATGTTCGTAGAGCAAACTATTCTCGGAGTACTTTACCTGGCATCAGCAGAGAGTTCCGTGTTGTTAGAGACAACAGGGTAAATCATATATATAAAGAAGTAAAGCCTCTTTCACAGCAGCACTTAGCATCTGCCAGTGAGGAGCTAAATGTAAACTTATCTGAAAAGGGTTCTTCAGCTTCCTCCAGTCATAGGTCATCTGGCACTAGGAATTCATCCCAGGCAATAAATGGTCCTTCTGATTCATTTGCTAGATACCCGAAAGATGCTGTTCCAAATATCGTTGACAGAAAAATTGCTTCTGAGGATAAGGATAAGGATAAGCAAAGCATGATTTCAAATGCAGCAGGACGGGTGCAACCAATTAAGCCTAACCAAATTCATCAAAATCCTGCTTCAGTGGCATCTAGCAGTTCTGCTGTTGGGGTGTATTCCTCTTCAACAGATCCAGTTCATGTGCCCTCTCCTGATTCAAGATCATCAGGTGTTGTTGGAGCCATTAGGCGTGAAGTTGGGGTTGTTGGTGTTCGGCGACAGCCTTCAGACAACAAAGTAAAACAATCATTTGCTCCTAGCAGCTCTTATGTTGCTGGAAAAGATGGTACATCTGCAGATTCTTTTCAATCAGTTGGTGCTGTCCTGAAGACTGAACAATTTAGTCAAACTAAAGTAACTGAACCTTCATTATCTGGTGTGCCAGTTAGCAGACCGTCTGTGAACAACCAGTATAATGGTAGACCACATCAACAACTCGTGGGACATCAAAGAGTTTCCCAGCAAAATAAGGAATGGAAGCCTAAATCTAGCCAGAAGCCAAACTGTAATAATCCTGGAGTAATTGGAACCCCAAAAAAGGCTGCTGCTTCTGCTTCTCCTCCAGCAGAAAATTCTGGAGATATAGAGTCAGATGCAGCAGAGCTTCAAGATAAACTTTCCCAACTAAATATATATGAGAACCAAAATGTGATCATAGCACAGCATATTCAAGTTCCAGAGACTGACCGATGCCGGCTGACCTTTGGTACCATTGGGACTGAAATTGATTCTTCAAGGCTTCAATCTAAGTATCACATAGTAGGACCTTCCGAAAAATCAAATGATGAATTGGCTGCAAGCTTGGCAGTACCTGCTCCAGAGTTGTCCACTGATGATGTTTCTGGGAGTAAACAGGTGGACTTACTGGATGAACACATAAGAAGTTCTGGGTCGGACTCTCCTGTATCTGGTGCTCCTTCTGAGCAACATTTGCCTGATAACAAAGACTCTTCTTCAAACACTCAGAATCTGGACAATTATGCTAACATTGGGTTGGTTCGTGATAGCAGTCCATCCTATGCACCTTCAGAACCTCAGCAGCAAGATTCTCATGATATGCCAGGCTTTGCGGCGTATGATCCTCCAACTGGGTATGACATTCCTTATTTCAGACCTACAATTGATGAAACTGTACGAGGGCAGGGTTTATCATCTCCTCAGGAGGCTTTGATCTCCCATGGAACCAATAATACTCCTGCTTCCACAATTGCCATGGTACAACAACAGCAACCTCCTGTGCCGCAAATGTATCCACAAGTGCATGTTTCACACTTTGCTAATCTTATGCCATATCGTCAGTTTCTGTCCCCGGTTTATGTTCCACCACCTATGGCAATGCCTGGATATTCAAGTAATCCTCCCTACCCTCACCCAACCAATGGCAACAGTTACTTGTTAATGCCTGGAGGTGGTTCCCATCTTAATGCCAACAACCTCAAATATGGAGTTCAACAGTACAAGCCTGTGCCTGCTGGAAATCCTGCAGGGTTTGGAAATTTTGCTAGTCCAGCTGGATATGCCATGATAACTCCTGGTGTGGTTGGGGGTGCAACAGCTCTTGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTTCCAAATCCTCAGGCGGAGACATCAGAAATTTGGTTACAAAATCCAAGGGATCTTCCTGGAATGCAATCTGCTCCATACTATAACATGCCAGGGCAAACACCTCATGCAGCTTACATGCCTTCACACACTGGTCATGCTTCCTTCAATGCAGCTGCAGCTCAGTCTTCTCACATGCAGTTCCCTGGCATGTACCACACTCCTCCACAGCCAGCTGCCATGGCTAGTCCTCACCATTTAGGACCACCATCTATTGGCAACAATGTTGGAGTTGGGGTAGCTGCAGCTGCTCCTGGAGCACAGGTTGGTGCCTATCAGCAGCCCCAATTGGGCCACATCAATTGGACAACAAATTTCTGA 2595 0.4497 MVPGSRTESGTGTHLLSARVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETTQKLLNQDPFHEVKRRRDRKKEPQNVGNNGSADSRRPSENNSGQGVKFHTPSERNVRRANYSRSTLPGISREFRVVRDNRVNHIYKEVKPLSQQHLASASEELNVNLSEKGSSASSSHRSSGTRNSSQAINGPSDSFARYPKDAVPNIVDRKIASEDKDKDKQSMISNAAGRVQPIKPNQIHQNPASVASSSSAVGVYSSSTDPVHVPSPDSRSSGVVGAIRREVGVVGVRRQPSDNKVKQSFAPSSSYVAGKDGTSADSFQSVGAVLKTEQFSQTKVTEPSLSGVPVSRPSVNNQYNGRPHQQLVGHQRVSQQNKEWKPKSSQKPNCNNPGVIGTPKKAAASASPPAENSGDIESDAAELQDKLSQLNIYENQNVIIAQHIQVPETDRCRLTFGTIGTEIDSSRLQSKYHIVGPSEKSNDELAASLAVPAPELSTDDVSGSKQVDLLDEHIRSSGSDSPVSGAPSEQHLPDNKDSSSNTQNLDNYANIGLVRDSSPSYAPSEPQQQDSHDMPGFAAYDPPTGYDIPYFRPTIDETVRGQGLSSPQEALISHGTNNTPASTIAMVQQQQPPVPQMYPQVHVSHFANLMPYRQFLSPVYVPPPMAMPGYSSNPPYPHPTNGNSYLLMPGGGSHLNANNLKYGVQQYKPVPAGNPAGFGNFASPAGYAMITPGVVGGATALEDSSRVKYKDNLYVPNPQAETSEIWLQNPRDLPGMQSAPYYNMPGQTPHAAYMPSHTGHASFNAAAAQSSHMQFPGMYHTPPQPAAMASPHHLGPPSIGNNVGVGVAAAAPGAQVGAYQQPQLGHINWTTNF 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00372 864 MobiDBLite consensus disorder prediction 506 573 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 61 77 - -
Phco1g00372 864 Pfam GBF-interacting protein 1 N-terminal 18 75 IPR009719 -
Phco1g00372 864 MobiDBLite consensus disorder prediction 325 384 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 289 310 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 160 196 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 248 269 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 248 262 - -
Phco1g00372 864 SUPERFAMILY UBA-like 19 77 IPR009060 GO:0005515
Phco1g00372 864 MobiDBLite consensus disorder prediction 508 545 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 160 187 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 325 407 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 78 103 - -
Phco1g00372 864 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 864 - -
Phco1g00372 864 MobiDBLite consensus disorder prediction 51 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00372 Phco-Chr1 2869016 2877448 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00372 1 2869016 2877448 Phco1g00372 1 2869016 2877448 ECH