Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00370 ATGTTGACTTGCATAGCGTGTACCAAGCAACTAAATAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAAGCTGTTCACACACCCAGCACCAAGCAAGCCATCAAGGCTCTCACTGCACAGATCAAGGACATGGCAGTGAAAGCTTCTGGGGCATATAAAAGCTGCCGACCTTGTTCAGGATCTTCCAATGGTAACAGGAATAGGAAGTATGCAGACTCAGATATGGGGTCAGATTCAGCTAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAGACAGAAGGTGGTAGGGGGAAAGGGCTTTCCAGTGGGGAAGGAACACCAGCTTCAGTCAGTGGACGTACTGAGTCAGTGGTGTTCATGGAAGAGGATGAGCCTAAGGAGTGGATTGCACAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAAAGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAGAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACGCCACCTAGATCCGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGTCACTCCTCCACTCAGCAAAGAGCGAGCACCCCGCCATTTTCACCACCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCAAATGCATCTTCACCCTTGCTATGAGACAAGTGGTCTGGCATCGACACCTAATCTTTCCAACATTAGTGCACCAAAGACTGAAAAATCTTCCCTTGATGGTTCTGCAAGGACCAGTTCATCTGGAGAAGATCACTCAGGCGAGTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTCTACATCACTATCAGAGCACTGCCAGGTGGAACCAGAGAACTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA 1107 0.4833 MLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDMGSDSARFNWAYRRTGSSNSTPRMWGKETEGGRGKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERAPRHFHHPMGMGYSSSDSLDHHQMHLHPCYETSGLASTPNLSNISAPKTEKSSLDGSARTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00370 368 MobiDBLite consensus disorder prediction 200 252 - -
Phco1g00370 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Phco1g00370 368 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Phco1g00370 368 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Phco1g00370 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Phco1g00370 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Phco1g00370 368 MobiDBLite consensus disorder prediction 272 312 - -
Phco1g00370 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Phco1g00370 368 MobiDBLite consensus disorder prediction 84 99 - -
Phco1g00370 368 MobiDBLite consensus disorder prediction 56 70 - -
Phco1g00370 368 MobiDBLite consensus disorder prediction 56 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00370 Phco-Chr1 2860830 2864048 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00370 1 2860830 2864048 Phco1g00370 1 2860830 2864048 ECH