Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00364 ATGAGCATTAGAATGGCAGAGGGAGAATCTAGTGAGGAGGTTCATGTTCCGGGTGAGATTGATTGGCAAATGCTTGATAAATCCAAGTTCTTCTTCCTTGGTGCTGCTCTTTTCTCTGGGGTTTCTGCAACCCTTTACCCTGTTGTTGTGTTGAAGACTAGGCAGCAAGTGGCTCAGTCCCAAGTATCTTGCATCAGCACTGCATTTTCATTGATTAAGGGTGAGGGTTTTAGAGCATTGTACCGTGGGTTTGGGACTTCTCTGATGGGTACAATCCCTGCTAGGGCTCTGTACATGGCTGCATTAGAGGTTACCAAAAGCAATGTGGGCACGGCCACGGTTAGGTTTGGTCTTGCTGAACCTACTGCTTCTGCAGTTGCCAATGCAGCTGCTGGCTTGAGTGCAGCCATGGCAGCACAGCTTGTGTGGACCCCTGTTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGGTTGTTGTGATTCTGGCAGTCCTAAGGCTTCCGCATATAGGTACATCAATGGGATTGATGCCTTCAGGAAGATATTGAGCAATGATGGTCTTAGGGGCTTGTACAGGGGTTTTGGGATCTCAATTTTGACCTATGCCCCTTCAAACGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTCTGGGGTGGAGTTGGGTACTACTTGTACAAGGGCAATGATAATGCAGCTAACAGTGCTTTGAGGCCTGATACAAGAACTATGATGGCAGTTCAGGGAGTCAGTGCAGCAGTGGCTGGTGGCATGTCTGCTTTGATCACCATGCCACTGGATACCATCAAGACAAGACTGCAGGTCTTGGATGGCGACGAGAACGGCCGTCGTGGACCCTCCATTATGCAGACAGTGAGGAGTCTGGTTAGGGAAGGTGGTTGGATGGCTTGTTACAGAGGATTGGGGCCTAGATGGGCATCAATGTCAATGTCTGCAACAACAATGATCACTACTTATGAGTTCCTCAAACGGCTCTCCGCAAAGAACCAAGAGGTTTTAACATGA 1032 0.4864 MSIRMAEGESSEEVHVPGEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCISTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRFGLAEPTASAVANAAAGLSAAMAAQLVWTPVDVVSQRLMVQGCCDSGSPKASAYRYINGIDAFRKILSNDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLYKGNDNAANSALRPDTRTMMAVQGVSAAVAGGMSALITMPLDTIKTRLQVLDGDENGRRGPSIMQTVRSLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00364 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 218 IPR018108 -
Phco1g00364 343 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Phco1g00364 343 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Phco1g00364 343 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Phco1g00364 343 PRINTS Mitochondrial carrier protein signature 254 276 IPR002067 GO:0055085
Phco1g00364 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 245 334 IPR018108 -
Phco1g00364 343 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 340 - -
Phco1g00364 343 Gene3D Mitochondrial carrier domain 30 341 IPR023395 -
Phco1g00364 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Phco1g00364 343 Pfam Mitochondrial carrier protein 123 219 IPR018108 -
Phco1g00364 343 Pfam Mitochondrial carrier protein 249 338 IPR018108 -
Phco1g00364 343 Pfam Mitochondrial carrier protein 37 108 IPR018108 -
Phco1g00364 343 SUPERFAMILY Mitochondrial carrier 23 331 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00364 Phco-Chr1 2797466 2798497 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00364 1 2797466 2798497 Phco1g00364 1 2797466 2798497 ECH