Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00320 ATGGTAACAACGGTAAGGCGTCTGGACTATGAGTCAAAGGAGGGCGAGAACACCTTCAGAACAATGAGCTTCAACAAGTGCAGAAACCTTGATGAGTTGTATAAGCCTGAGGAGTTGGATGAGGTTATTACTGAGAAATCTACAAGCCCAAAGAAAAAGAAGGTGGGGAATCTGAAGCTGCAAACCACATTCTCCTTCAAATATCTACTTTCTGATAATTCTGATTCAAAGGAGAAAGTTGATGGCTTTCTCAATAAACAAAGCCCCCCAATTGTGTTGCAAAAATCAGAAATTTTGTCAAAGTCTGTTGGGGAGCTTGATGTTGCTGCAATCAAGCTGCAGAAGGTTTACAAGGGCTACAGGACCAGAAGAAATCTTGCAGATTGTGCAGTTATTTGTGAGGAGCTATGGTGGAAAGCCTTGGATTTTGCTGCTCTGAGCAGGTGTTCCTCATCAAAATTTGACTCTGGTAAATCAGAAACAGCTAGTTCAAAATGGGCAAGAGCTAGGACCATGGCTGCTAAGGTGGGAAAAGGTTTGTCCAAAGATGATAAGGCGCAGGAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCACGTCACCGTTATGGACACAATCTGCACTTATACTATGATGTTTGGTTTCATAGCCAGAGTTCACAACCTTTTTTCTACTGGTTGGACGTTGGAGATGGGAAAGAAGTAAATCATGAGAAGTGCCTAAGAAGTGAATTGTATAAGCAGTGCATAAAGTATCTTGGACCCAAAGAGAGGGAAGCATATGAAGTGGTTATTGAGGGAGGAAGGCTTGTTTATAAAAGGAGCCAGAACCTTGTACACACTGTGGAGGGATCTAAGTGGATTTTTGTTCTGAGCTCTTCTAGAATTTTGTATGTTGGTGAGAAAAAGAAAGGTCAATTTCAGCACTCAAGTTTTTTGGCTGGAGGTGCTACTATTGCTTCTGGAAGATTGGTTGCCAAAGATGGAGTTATTGATGCGATATGGCCCTACAGCGGTCACTACTGTCCTACAATGAAGAACTTTATGGAATTCATTGGGTTCTTGACGGAACATGATGTGGACTTGACCAATGTAAAGAAGTATGCAATTGATGATGACATCCCACCTTCAAAACCTGCTGATGAGGAGCTACAGATGGCTAACAATGGTAGTTCAAGTGGCTTTACCATTGCCAAAAGCTGCACTGAAGACCATATAGGTCAATCTGGTGCCAATATGCAAACTTCAACAGTTAAAGAGAGCAAACGATTGTCAAGAAAATGGACAACTGGAGCTGGTCCTAGAATTGGTTGTGTGAGAGAGTACCCTGCAAAACTCCAAGTTAAGGCACTTGAACAGCTGAATCTATCACCTAGAGTCAACCGTGGAAAAGTAGCAGCCAAGGCACCAATTCCCTCACCAAGGCCTAGTCCTAAAATCCACCTATCCCCAAGATTTGTGCACATCGGAATTCCTAGCCCATGA 1488 0.4274 MVTTVRRLDYESKEGENTFRTMSFNKCRNLDELYKPEELDEVITEKSTSPKKKKVGNLKLQTTFSFKYLLSDNSDSKEKVDGFLNKQSPPIVLQKSEILSKSVGELDVAAIKLQKVYKGYRTRRNLADCAVICEELWWKALDFAALSRCSSSKFDSGKSETASSKWARARTMAAKVGKGLSKDDKAQELALRHWLEAIDPRHRYGHNLHLYYDVWFHSQSSQPFFYWLDVGDGKEVNHEKCLRSELYKQCIKYLGPKEREAYEVVIEGGRLVYKRSQNLVHTVEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVAKDGVIDAIWPYSGHYCPTMKNFMEFIGFLTEHDVDLTNVKKYAIDDDIPPSKPADEELQMANNGSSSGFTIAKSCTEDHIGQSGANMQTSTVKESKRLSRKWTTGAGPRIGCVREYPAKLQVKALEQLNLSPRVNRGKVAAKAPIPSPRPSPKIHLSPRFVHIGIPSP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00320 495 ProSiteProfiles IQ motif profile. 106 135 IPR000048 GO:0005515
Phco1g00320 495 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 45 481 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00320 Phco-Chr1 2370321 2373111 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00320 1 2370321 2373111 Phco10g01795 10 40342845 40345551 PCT