Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00304 ATGACTGATAGGGTTCATCCTTCTGCCAAAACCACCAAGCCAACATTCCCCCCAACAAAATCCCAACTTGCTGGCGCCAATCGCCCCACCTACCGCCCCCAACCGCCCCGCCGCCGCAGCAGCCGCGGCTGTGCTTCCACCCTCTGCTGCTACCTCCTCCTGATCCTCCTGTTCCTCCTCCTCCTCATTGGCGGCGCTGGAACCGTCTTCTACTTCCTCTACCACCCCCAACGCCCCTCGTTCTCCGTCACCTCCCTCAAACTCTCCTACTTCAACCTCACCTCTCCCTCCACCTTCAAGGCCAAGTTCGACCTCACTCTCTCAACTACCAACCCCAACGACAAGATCCTCTTCTCCTACGACCCCACTTCCGTCTCCCTCCTTTACGCCGACGCCACGCTCGCCACCGCCACCATCCCCTCTTTCCTCCACCACCAGAGGAACACCACCGTGCTCGAGGCCTACGTCACTAGCACCGAGGAAGAGGTGCAGACCGACACCGTCACGGAACTGAAGAGGAGCACGAAGAGCAAGAGCGAGGTGGCGCTAAAGGTGAAGTTGGAGACGAAGGTGGAGGCCCAGATGGGTGTACTCCGAACCCCGGGCGTCGGAATCACCGTTTTATGCGACAACATCGCCGTGACTCTCCCCGACGGCGAGAAACCGGCGTCCGCGTCGGTAGAGAATACCGCGTGCGAAGTGGATGTGAGGTTCAAAGTCTGGAAATGGACTGTAGGATGA 741 0.5951 MTDRVHPSAKTTKPTFPPTKSQLAGANRPTYRPQPPRRRSSRGCASTLCCYLLLILLFLLLLIGGAGTVFYFLYHPQRPSFSVTSLKLSYFNLTSPSTFKAKFDLTLSTTNPNDKILFSYDPTSVSLLYADATLATATIPSFLHHQRNTTVLEAYVTSTEEEVQTDTVTELKRSTKSKSEVALKVKLETKVEAQMGVLRTPGVGITVLCDNIAVTLPDGEKPASASVENTACEVDVRFKVWKWTVG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00304 246 SUPERFAMILY LEA14-like 56 158 - -
Phco1g00304 246 Gene3D - 72 201 - -
Phco1g00304 246 MobiDBLite consensus disorder prediction 1 42 - -
Phco1g00304 246 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 222 - -
Phco1g00304 246 Pfam Late embryogenesis abundant protein 106 205 IPR004864 -
Phco1g00304 246 MobiDBLite consensus disorder prediction 7 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00304 Phco-Chr1 2243814 2244554 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00304 1 2243814 2244554 Phco1g00304 1 2243814 2244554 ECH
Phco10g01812 10 40441389 40442144 Phco1g00304 1 2243814 2244554 PCT