Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g00282 | ATGAACGGTGGTGACGAGGTCGTGGCAGCTCCGGCGGGTCCACCGCAGCCGCTGGAGTGGAAATTCTCTCAGGTTTTCGGGGAACGTACGGCGGGGGAGGAAGTTCAGGAAGTGGACATTATTTCTGCTATTGAGTTTGACAAGTCTGGTGATCATCTTGCTACCGGGGATCGTGGTGGTCGAGTAGTTCTCTTTGAGAGAACAGATACAAAAGATCATCGTGGATCAAGAAGGGATATGGAGAGGATGGACTATTCTATTAGTAGACATCCTGAGTTCCGTTATAAAACAGAGTTTCAGAGTCATGAGCCTGAGTTTGACTATCTTAAGAGCTTGGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGTCAAACCGCTAATGGTGCTTTATTCCTTCTATCTACAAATGATAAAACCATCAAATATTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAATTTCTGACATGAACGTTGATCCTAAAGCAATGGGAAATGGCTCTATAGCGAGTTCGAGTAATTCCAGTAGCTCTAGATCATTTCTTGCAAATGGAGTATCTCCAGATGGACCCTACAATTATTTAAGCAACGATTTCTCATTTCCATCAGGAGGCATACCTTCACTAAGATTACCATTGGTAACCAGCCATGAGACCAGTTTGGTGGCTCGATGCCGAAGAGTATATGCCCACGCACATGATTATCATATTAATTCTATTTCAAATAACAGCGATGGTGAAACTTTCATATCAGCTGATGATTTACGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACTGAGGTTATAACATCAGCAGAATTTCACCCTACACACTGTAATACATTGGCATATAGCAGTTCAAAGGGTTCAATTCGTCTTGTTGACTTGCGGCAGTCAGCATTATGTGATTCTCATGCCAAACTATTTGAGGAACAGGAGGCCCCTGGATCCCGATCATTTTTCACAGAGATTATTGCTTCTATCTCGGACATCAAATTTGGGAAGGAGGGAAGATATATACTTAGTCGTGATTACATGACCCTAAAGTTATGGGACATAAATATGGATTCTGGACCAGTTGCTACATTCCAGGTTCATGAGTATTTAAGGCCAAAGCTTTGTGATTTATATGAAAATGATTCAATTTTTGATAAGTTTGAGTGTTGTCTAAGTGGTGATGGATTGCGTGTTTCAACTGGCTCTTACAGCAATCTATTCCGAGTGTTTGGTTGTGTTCCTGGAAGTACCGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGACGTCAAGTTCCAACTCCTTCAAGGCCTTCTAGATCACTGGGAAACAGTATAACAAGAGTTGTAAGACGTGGAGCCGAAAGCACCGGAGTTGATGCAAATGGGAATTCTTTTGATTTCACTACAAAGTTGCTGCACTTGGCATGGCACCCAACTGAGAATTCAATTGCATGTGCTGCTGCAAATAGCTTATACATGTACTATGCCTGA | 1545 | 0.4117 | MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHRGSRRDMERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISDMNVDPKAMGNGSIASSSNSSSSRSFLANGVSPDGPYNYLSNDFSFPSGGIPSLRLPLVTSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKEGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYSNLFRVFGCVPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAESTGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA | 514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g00282 | 514 | PIRSF | PPA2_B55 | 11 | 514 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PANTHER | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B | 15 | 514 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | Gene3D | - | 35 | 512 | IPR015943 | GO:0005515 | |
| Phco1g00282 | 514 | SMART | WD40_4 | 105 | 145 | IPR001680 | GO:0005515 | |
| Phco1g00282 | 514 | SMART | WD40_4 | 272 | 312 | IPR001680 | GO:0005515 | |
| Phco1g00282 | 514 | SMART | WD40_4 | 222 | 261 | IPR001680 | GO:0005515 | |
| Phco1g00282 | 514 | SMART | WD40_4 | 31 | 66 | IPR001680 | GO:0005515 | |
| Phco1g00282 | 514 | Pfam | WD domain, G-beta repeat | 225 | 261 | IPR001680 | GO:0005515 | |
| Phco1g00282 | 514 | ProSitePatterns | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 231 | 245 | IPR018067 | - | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 483 | 512 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 261 | 288 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 318 | 345 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 92 | 120 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 233 | 260 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 121 | 149 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 45 | 65 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 289 | 317 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 346 | 373 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 374 | 399 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | PRINTS | Protein phosphatase PP2A 55kDa regulatory subunit signature | 400 | 426 | IPR000009 | GO:0000159|GO:0019888 | |
| Phco1g00282 | 514 | FunFam | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B | 208 | 510 | - | - | |
| Phco1g00282 | 514 | SUPERFAMILY | WD40 repeat-like | 39 | 506 | IPR036322 | GO:0005515 | |
| Phco1g00282 | 514 | ProSitePatterns | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 105 | 119 | IPR018067 | - | |
| Phco1g00282 | 514 | MobiDBLite | consensus disorder prediction | 442 | 461 | - | - | |
| Phco1g00282 | 514 | FunFam | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B | 36 | 196 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco1g00282 | 1 | 2043343 | 2051096 | Phco1g00282 | 1 | 2043343 | 2051096 | ECH |