Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00275 ATGTTGTTGCCAACGAGTGGAGTAGTAGGGATGAATTCTGTAATGGATGATATGACTTTGATTCAGCAGAGCCAGAGGCATAATTTGGTTGTGAGAGAGCTTGGTGAGGAGATTGATTTAGAAATTGGACCTGGGGATGATGACCCTTCATTTGGTAACGCAACTCTAATTGGTGCACCAATGCGGGAATCTTCTGCAGAAGAACATGGTGAGAGCAAGCAAATGGGGATGGTTTCTCAGCTTTCTAATGATGCTCAAGATATGTCCAAAAACCAACAGGTGAAAAGGAAGAAAAAGGTTGTTAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTTTGTAGATATGAAGGATGGGACACCTAGGATTTTCTGCTCTGTCTGCAGGGAGTATGGACGGAAGCATAGAAGAAATCCTTATGGGAATGAGGGCAGTCGTAATATGCAAATGAGTGCTCTTGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTTGACAAGCCTGTTTATGTAAAAGCAGGATCAATACTTGAAGCTACACTAAAAAGGGATCCTCATGAGGTTGAATTCATTCAGGCAGTCCAGGAGGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAATTCTCGTTATGTTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGCTTTTCGAGTTTCATGGGTGGATGATAGGGGTGAGACACATGTAAATCGGGGCTTTAGGGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTATTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTATCACCATACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGCTACCTAGGGCCTGACAAGGACCTTCCATCAGAGGAAATGGGCGTTGGTACACGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTAGCTGGTCATTTTCAGCAGCAGCCTAGCAGGAGTCACAGCTATGAATTGCGGCCTTCATCCGCTGTGCCTGCTACTGTTGACATAAGGAAAATTCCCTCACTACCCTTCTTTCTCTTTTCTCCATCCGTCACATGGACATGTGTCCTTCATTTTATTGTTGTATCTTTTTTTTCTTCTTTACTTGGAAGTTTTACAGGGCCAAGGATATTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGACTGGTTTTCTTTGCCCAGCTCATGCTTGCTGACATGAATAAAGAACTTAAAGGATTAAGATGTGTTGTGAGCGGCTCTGGAAAGATTGCAATGCATGTTTTGGAGAAGCTAATTGCTTATGGTGCTCTCCCCATTTCAGTATCAGATTCCAGAGGATATTTGGTTGATGAGGATGGATTTGACTACATAAAAATATCATTTCTGAGAGACATCAAAGCTCAGCAAAGAAGTTTGCGAGACTATTCAAAAACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCGTGGAGGGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACATAATGAAATTGATCAATCTGATGCCATTAATTTGGTTAATTCAGGTTGTCGTATACTAGTAGAAGGTTCAAACATGCCTTGTACCCCCGAGGCAGTTCAGATTTTCAGAAAAGCTAGTGTTCTCATTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTAGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCACCAGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTATCAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAGGCTCTGGTGCATGGAGCAGTCATTTCTGCCTTTCTAACCATTGCCCAAGCCATGACTGATCAAGGTTCTATATAG 2067 0.4209 MLLPTSGVVGMNSVMDDMTLIQQSQRHNLVVRELGEEIDLEIGPGDDDPSFGNATLIGAPMRESSAEEHGESKQMGMVSQLSNDAQDMSKNQQVKRKKKVVKRWREEWADTYKWAFVDMKDGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPVYVKAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERMIAFRVSWVDDRGETHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSIAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQQQPSRSHSYELRPSSAVPATVDIRKIPSLPFFLFSPSVTWTCVLHFIVVSFFSSLLGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYIKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWRERCDVAFACASHNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVQIFRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSI 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00275 688 Gene3D Glutamate Dehydrogenase, chain A, domain 3 191 234 - -
Phco1g00275 688 Gene3D Glutamate Dehydrogenase, chain A, domain 3 617 688 - -
Phco1g00275 688 Gene3D Leucine Dehydrogenase, chain A, domain 1 235 370 - -
Phco1g00275 688 FunFam NADP-specific glutamate dehydrogenase 191 234 - -
Phco1g00275 688 FunFam NADP-specific glutamate dehydrogenase 618 688 - -
Phco1g00275 688 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 143 372 - -
Phco1g00275 688 SMART ELFV_dehydrog_3 440 686 IPR006096 GO:0006520|GO:0016491
Phco1g00275 688 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 439 686 IPR036291 -
Phco1g00275 688 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 439 686 IPR006096 GO:0006520|GO:0016491
Phco1g00275 688 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 237 364 IPR006097 GO:0006520|GO:0016491
Phco1g00275 688 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 191 371 IPR046346 -
Phco1g00275 688 FunFam Glutamate dehydrogenase 445 610 - -
Phco1g00275 688 Gene3D - 445 610 - -
Phco1g00275 688 FunFam Glutamate dehydrogenase 235 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00275 Phco-Chr1 1972591 1981130 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00275 1 1972591 1981130 Phco1g00275 1 1972591 1981130 ECH