Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00272 ATGACATCAATACATCTGGAGGTTCCCCGCATCATATTATCATCTTTCATCTTTCTCCATAAGAAGAAAATGGCGACAGTTCCAGGGCAGCTCGTGTGGGAGATTGTGAAGAAGAACAACTCCTTTTTAGTGAAACAGTTCGGAAGAGGCACTCAGAGCGTTGAATTCAGCAGGGAGTCCAACAATCTCTACAACCTCAATTCCTACAAATTCTCTGGTTTGGCAAACAAGAAAACTGTTACCGTTCAGCCTGTTGGTAAGGATCTGTCAGTGTTGTTGGCTACAACAAAGACGAAGAAGCAGAACAAGCCTGCTGCGTTGCTCCACAAATCTGTGATGAAGAAGGAGTTCCGTAGGATGGCAAAGGCTGTTGAAAATCAGGTTGCGAATAATTACTACCGGCCTGACCTGAAGAAGGCTGCCCTTGCAAGGTTGAGTGTTGTTCACAGAAGCCTCAAAGTTGCGAAGTCTGGTGTCAAGAAGAGGAATAGACAGGCCTTGAAGGTCTCTGGTAGGAAGTGA 522 0.4559 MTSIHLEVPRIILSSFIFLHKKKMATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSYKFSGLANKKTVTVQPVGKDLSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVENQVANNYYRPDLKKAALARLSVVHRSLKVAKSGVKKRNRQALKVSGRK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00272 173 Pfam Ribosomal L28e protein family 31 151 IPR029004 -
Phco1g00272 173 PANTHER 60S RIBOSOMAL PROTEIN L28 24 173 IPR002672 GO:0003735|GO:0005840|GO:0006412
Phco1g00272 173 Gene3D - 29 156 - -
Phco1g00272 173 FunFam 60S ribosomal protein L28 28 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00272 Phco-Chr1 1951016 1954179 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00272 1 1951016 1954179 Phco10g01836 10 40609977 40611426 ECH
Phco1g00272 1 1951016 1954179 Phco1g00272 1 1951016 1954179 ECH
Phco10g01836 10 40609977 40611426 Phco1g00272 1 1951016 1954179 PCT