Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00259 ATGAATGGAGAGAGAGAGAGAGAGAGAGAGAAAGGGCGTCATTTTCGGTTGCCATATAAGTTCTGCATTTTCTGCTGCATTATGCATCATCCAAAGCAGCATAGCATTAAGATGAACATTGGAGCTCTTGTTTCACTCTTTGCATTTTCCTTCCTTAGTTGTGTGTATGCACAAGACACCACCCTTGTGCCTGCCATCATAACATTTGGTGATTCTGTTGTGGATGTAGGGAATAATAACTATCTTCCTACATTTTTCAAGGCTGATTACCCTCCCTATGGGAGGGATTTTTCTAACCACCAACCAACTGGGAGGTTTTGCAATGGCAAGTTAGCTACTGATATCACTGCTGACACGTTGGGTTTTAAGACCTATGCTCCTGCATATCTTAGCCCTCAGGCATCAGGAAAAAACCTCCTTATTGGAGCAAACTTTGCTTCTGCTGCATCTGGTTATGATGAAAATGCTGCTACTTTGAATCATGCAATTCCATTGTCCCAACAGTTAAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTCAAAAAGCAGCCTCAATTATCAAGGATGCATTGTACGTGCTTAGTGCTGGAAGCAGCGACTTTGTGCAAAACTATTACGTCAATCCTTGGATCAACAAAGCATACACTCCTGACCAGTATTCCTCCTACTTACTTGGTGTATTCTCAAGTTTTGTTAAGGAGTTGTATGGATTGGGAGCCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACTCTGATGCCCAAGGATTTAACAAGAAGCTTAACTCAGCTGCAGCAAATCTTCAAAAGCAACTTCCTGGTCTCAAGATTGCCGTTTTTGACGTTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATCGGGTTTTGTGGAGGCAAACAGAGGTTGCTGTGGGACCGGGACTGTAGAGACAACATCCTTTTTGTGTAATCCAAAATCACCAGGAACTTGTTCTAATGCCACCCAGTATGTGTTTTGGGATAGTGTTCATCCTTCAGAAGCAGCTAACCAAGTTCTAGCCGATGCATTAATTATCCAAGGCATAAGTCTTATCACATAA 1167 0.4293 MNGEREREREKGRHFRLPYKFCIFCCIMHHPKQHSIKMNIGALVSLFAFSFLSCVYAQDTTLVPAIITFGDSVVDVGNNNYLPTFFKADYPPYGRDFSNHQPTGRFCNGKLATDITADTLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDENAATLNHAIPLSQQLSYFKEYQGKLAKVAGSQKAASIIKDALYVLSAGSSDFVQNYYVNPWINKAYTPDQYSSYLLGVFSSFVKELYGLGARRLGVTSLPPLGCLPAARTLFGFHENGCVSRINSDAQGFNKKLNSAAANLQKQLPGLKIAVFDVYKPLYDLVQSPSKSGFVEANRGCCGTGTVETTSFLCNPKSPGTCSNATQYVFWDSVHPSEAANQVLADALIIQGISLIT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00259 388 SUPERFAMILY SGNH hydrolase 66 379 - -
Phco1g00259 388 CDD SGNH_plant_lipase_like 64 380 IPR035669 -
Phco1g00259 388 FunFam GDSL esterase/lipase APG 55 384 - -
Phco1g00259 388 Gene3D SGNH hydrolase 55 383 IPR036514 -
Phco1g00259 388 PANTHER GDSL ESTERASE/LIPASE EXL3 48 379 - -
Phco1g00259 388 Pfam GDSL-like Lipase/Acylhydrolase 66 378 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00259 Phco-Chr1 1863589 1865454 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00259 1 1863589 1865454 Phco1g00259 1 1863589 1865454 ECH