Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00256 ATGAAGCCTTTTCGTCTGAAATGTGGTTTGGCTTTGGCTCTTGCCTTTGCTGGATTTCTCTGCTCTCATATTGGAGCCAAGAGAATCAAACCTTCCCCTACTTCCCCCAAGGGGCACCCTTCAGAGGTAAAAAGGGCTGCTTCTAGTTCTCGCACCAATCTTTCAGAGGAAAATGTTTTGGATACTGAAGAAACATGCATTAGCAAGGTGAATTCTAGAAGTTCCCCATTGGGTCTCTCTCCAAGGACTAGAAAAAGTGGAGAGAAAGATGAGTTCCTCCTTCCTGAATTTAATGATCTTATCAAGGAAGCAGACTTTGGAGTCATCATTGCAGGTAGTTCTTTTAAGAAAGAGGTAGAAACACCAAGGTCAAAAGTAGGATCTCCTATGGCATATGCAAATGTTGACAAGGATGATAATGAGAAAGAGATCAGGAAACTCAGGAGCATGATCAGAATACTTCAAGAGAGGGAAACAAATCTTCAGGTTCAACTGCTTGAGTACTGTGGCATTAGAGAGCAAGAAGCAGCAGTGATGGAGCTCCAAAATAGATTGAAGATAAGTAATATGGAGGCCAAGATGTTCAATCTGAAGGTTGTGACCTTGCAGTCTGAGAATCGAAGATTAGAGGCACAAGTAGCTGATCATGCAAAACTGATATCTGAGCTCGAGACTGCAAAAACAAAAGTTAAGTTTTTGAAGAAGAAAATTAAGTATGAAGCTGAACAGAATAGGGAGCATATAATGAATCTTAAGCAAAAAGTTGCCAAGTTGCAAGATCATGAATTCAAAGTTGCTGCTAACGATCAAGAGATTCAAATTAAGCTGAAAAGGCTTAAGGATCTTGATTGTGAGACAGAACAGTTGAGAAAATCTAATTTGAGACTGCAGATGGAAAATTCCGACTTATCTCGAAGATTGGATTCTACTCAGCTCCTTGCAAATGCTGTTCTGGAAGATCCTGAGCCACAAGCTCTGAAGGAAGAAGGTGAACGACTCAGACAAGAGAATGAAGGGTTAGCGAAAGAACTTGAGCAATTGCATGCAGATAGATGTTCAGATCTTGAAGAGTTAGTTTATTTGCGGTGGATAAATGCTTGCTTAAGACATGAACTACGAAGTTATCAGCCCCCACCTGGTAAAACAGCAGCAAGGGACTTAAGTAAAAGCTTGAGTCCTACCTCTGAGAAAAAAGCCAAGCAACTTATACTTGAATATGCAAGCAATGAAGTGCGAGGGAGCATTTCTGATATGGACTCTGACCAATGGTCTTCTTCCCAGACTTCTTTTTTCACAGACCCTGGAGAGCATGAAGATTATTCTCTTCATGATACTTCATCTGAGGCCAAAGTTAACAATCCAACCAAGTCAAGGATTTTTGGCAAGCTTATGAGGCTGATACGAGGTAAAGATAGCCACCACCAACGTGGTCGAGTTATATCTAAAGAAAAATCAATTTCCCGAGAAGATAGCAATTCTTCACATTTCAGCTTGAGTATGTCAACAGGAAATGAGTGTCTTAGGAGCGAGTATACCACTCCCTCTGCCACATCTAGAACTTCCTTTGACTATAACCAAAGCCAGAGTTTGAAGGATGATAGTGGGAGAAATTCAGATAGCCATACCCCAGGAAGCTCCAAGAATTTCAGTCCAAATAGAAGAAGTTCAGCAGATTCCAAAAACCGCCTTGATTCTTTCTCAGAATCCTCTGGCATGGAGAAAACTAATTTGGAAAAATATGCTGAAGCTTTAAAAAATTCCACTGAAACCTCCAAAATTAAATCACACAGAAGATCAGCATCATATAGTTCGTTTTAA 1818 0.4043 MKPFRLKCGLALALAFAGFLCSHIGAKRIKPSPTSPKGHPSEVKRAASSSRTNLSEENVLDTEETCISKVNSRSSPLGLSPRTRKSGEKDEFLLPEFNDLIKEADFGVIIAGSSFKKEVETPRSKVGSPMAYANVDKDDNEKEIRKLRSMIRILQERETNLQVQLLEYCGIREQEAAVMELQNRLKISNMEAKMFNLKVVTLQSENRRLEAQVADHAKLISELETAKTKVKFLKKKIKYEAEQNREHIMNLKQKVAKLQDHEFKVAANDQEIQIKLKRLKDLDCETEQLRKSNLRLQMENSDLSRRLDSTQLLANAVLEDPEPQALKEEGERLRQENEGLAKELEQLHADRCSDLEELVYLRWINACLRHELRSYQPPPGKTAARDLSKSLSPTSEKKAKQLILEYASNEVRGSISDMDSDQWSSSQTSFFTDPGEHEDYSLHDTSSEAKVNNPTKSRIFGKLMRLIRGKDSHHQRGRVISKEKSISREDSNSSHFSLSMSTGNECLRSEYTTPSATSRTSFDYNQSQSLKDDSGRNSDSHTPGSSKNFSPNRRSSADSKNRLDSFSESSGMEKTNLEKYAEALKNSTETSKIKSHRRSASYSSF 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00256 605 Coils Coil 171 236 - -
Phco1g00256 605 Coils Coil 330 350 - -
Phco1g00256 605 MobiDBLite consensus disorder prediction 415 434 - -
Phco1g00256 605 MobiDBLite consensus disorder prediction 491 574 - -
Phco1g00256 605 Coils Coil 279 299 - -
Phco1g00256 605 MobiDBLite consensus disorder prediction 464 490 - -
Phco1g00256 605 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 5 485 IPR040265 -
Phco1g00256 605 MobiDBLite consensus disorder prediction 45 60 - -
Phco1g00256 605 MobiDBLite consensus disorder prediction 415 605 - -
Phco1g00256 605 MobiDBLite consensus disorder prediction 374 398 - -
Phco1g00256 605 MobiDBLite consensus disorder prediction 30 60 - -
Phco1g00256 605 Coils Coil 137 164 - -
Phco1g00256 605 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00256 Phco-Chr1 1839425 1842070 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00256 1 1839425 1842070 Phco1g00256 1 1839425 1842070 ECH
Phco10g01855 10 40752267 40754891 Phco1g00256 1 1839425 1842070 PCT