Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00254 ATGACTTTCCAGTGGAGTACCATTGATAGCACTATTGGTAGTACCGTCAGTAGTACCCTCGGTAGTACTCTCGGTAGTACCCTCGGTATTACCCTCGGTAGTAACTTCGGTAGTAACCTGGGTAGTACCTTCGGTAGTTTCCTTGGTAGTACCCTCGGTAGTACCCTCGGTAGTACTCTCGGTAGTACCCTTAGTTGTACCTCGATAGCACTATTGCACCATTGTAGTACCACTGGTAGTACCAACAATAGTATCAGTGGTAGTCTCAATGGTAGTACCATTGGTGACACACTTGGTAGTACCACTTGTGGTACCATTGGTTGTACTAGTGGTAGTACCAATGGTAGTACTAGAGGTATTACCCTCGGTTGTCCCATTGGTAGTACAAGTGGTAGTACCCTCAGTAGTACCATTGATAGTACTAGTAGTAGTAACAGTACCATTGGTAGTACCGTTAGTAGTACCCTCGGTAGTAACCTCGGTAGTAATCTGGATAATACCCTCGGTAGTACCATTGGTAATACCATTGGTAGTATTTGTGGTAGTATCCTCGGTACTACCCTCGGTAGCACCCTCGATAGTAATCTCAGTAGTACCCTCAGTTGTAACCTCAGTAGTACCCTCGGTGGCAATACCATTGATAGTACCATTGGTATTACCAGTGGTAGTACCATTGGTTGTACCTTAGGTAATACCACTTGTGGCACCATTGGTAGTACTAGTGGTAGTACCACTGGTAGTACCCTCGGTAATACCAACGGTAGTACCATTGGTATTACCCTCGGTAATACCAACGGTAGTACCATTGGTATTACTACTAGTAGTACCCTCAGTAATACCATTGGCAGTAGCATTGATAGTACCAATAGTAGTACCGTTGTGGCATTCTCATTGATAGTACCATTGGTATTACCAGTGGTAGTACCAGTGGTAGTACCAATGGTAGTACTATTGGTGGTACCTTTGGTAGTACCACTTGCGTGTTTGATTGAAAACCAGTGGTGCAAAGCGCTCGTGCGTTGGATTATGACTTACCAGTGTATTATTGATAGTACAAATGGTAGTACCGTCAGTAGTACCCTCGGTAGTACTATCGGTAGTACCCTCTGTAGTACCCTCGCTAGTACCCTCAGCAGTACCCTTGGTAGTACCATCGGTATTACCATCGGTAGTATCCTCGGTAGTACCGTCGGTAGTAACCTAGGTAGAACCCTCGATAGTACCCTCGGTAGTAACCTCGGTAGTACCATCGATAATATCCTCGGTAATATCCTCGGTAGTACCCTTGGTAGTACTATTGGTTGGTTTAAAACTTGTGGCTCGAAGCTACCTGGTAGTATCAGTGGTAGTACCAGTGGTAGTACCAGTGGTAGTACCAGTGGTAGTACCAATGGTAGTACCATTGGTGGTACCTTTGGTAGTAGCGCTTGTGGTACCGTTGGTAGTACTAGTGGTAGTACCCTCGGTAGTACTAGTGGTAGTACCCTCGGTAGTACTAGTGGTAGTACCCTCGGTAGTACTAGTGGTAGTACCCTCGGTAGTACCGTCGGTAGTACCATTGGTAGTACTAGTTCTAGTACCTTCGGTAGTGCCATCAGTAGTACCATTGGTAGTATCAGTAGTAGTACCGTTGGTACTACCAGTGTTTGGTTGAAAACCAGTGGTGCAAAGCTACGTGGCATTACCATTGATAGTACCATTGGTAGTACCAGTGGTAGTGCCACTGGTAGTACCATTGGTAGTGCCACTGGTAGTACCATTGGTAGTGCCACTGGTAGTACCATTGGTAGTGCCACTGGTAGTACCATTGGTAGTGCCACTGGTAGTACCATTGGTAGTGCCACTGGTAGTACCATTGGTAGTGCCACTGGTAGTACCATTGGTAGTGCCCTGGGTGAGAAGTACTCTTCCCATCGTATGCTTCGAGCTGTGAAAAATCGATTTGGATCCACTGATGAGCTTGGAGTTTTTGGGATGTCACATTCAGGACTCCAGGCTATTTCAAATGCCAGTGAAATGTTTCTCAGTGGGCAACACCTGGATTCAGAAATTTTAGCTGGACTAGCGGTTGCTGTAATCATGGATGGGTCCCGGACATTTCTTATTGAAATTCAGGCACTTTGTCTTTCTAGTTCAATAGGTTCAAGGCAAGTTAATGGTATGGTATTAGACGCTGAGAAGAAGAAAAGGCTGGCTGATGTGCTGAGTCGCCGTACTGCGGGTGGTTCAGGCCCTGCTGGTCCTTCATCGCCTGCTGTGGCTGCCTCAGAACCAACTACCGAGAAGTCAAAGAGGGCAGCCCCAGTAGAGATCTCTGAGGACGAAGACACCTGCTCTGGCCTCGTCTTCAAGAGGAAGAGGGTGGAGGTTGCTGCAGAGGTCTCCTCCGCAACAGAGGGGCAACCTCCCTCCTTCAGGGAGCACCCTCCCAGTGCTTCATCTCCCCCTGAGCCAATCTTAGCGCTCGAGGGTGGAGGGGAGAGTGCCCCTTCAACCAGCCAAATGCCTTCTGCTCCCGAGCTGCCTCCCCTTCTCCAGCGGGCTCTTGCGCAGATGCCTGGCCAAGCTGCCATGGAGGCCATGGACGGGAACTCCCTAGGGGACCTCATCAGCCATGGCCTTGGGGAGAGGGCCACCAACCGAGAGGTTCAGCTGGGCAAGGTTGAGGAGGAACTTGCCCAACAAACTGAATTGCTGAAGAAGACTGAGGCGGAGCTCACTGAAGATGCCACCGATGCCTACGGGGAGGGGTTTAGTGATGCCCTTGCTCAGTTTGTCTGCGTGCATCCTGAGATGGACCTCTCGCCATTCTCCGTAACTTCGCAGGTGGTTGACGGGCAAATAGTGCCCAGATAG 2856 0.4884 MTFQWSTIDSTIGSTVSSTLGSTLGSTLGITLGSNFGSNLGSTFGSFLGSTLGSTLGSTLGSTLSCTSIALLHHCSTTGSTNNSISGSLNGSTIGDTLGSTTCGTIGCTSGSTNGSTRGITLGCPIGSTSGSTLSSTIDSTSSSNSTIGSTVSSTLGSNLGSNLDNTLGSTIGNTIGSICGSILGTTLGSTLDSNLSSTLSCNLSSTLGGNTIDSTIGITSGSTIGCTLGNTTCGTIGSTSGSTTGSTLGNTNGSTIGITLGNTNGSTIGITTSSTLSNTIGSSIDSTNSSTVVAFSLIVPLVLPVVVPVVVPMVVLLVVPLVVPLACLIENQWCKALVRWIMTYQCIIDSTNGSTVSSTLGSTIGSTLCSTLASTLSSTLGSTIGITIGSILGSTVGSNLGRTLDSTLGSNLGSTIDNILGNILGSTLGSTIGWFKTCGSKLPGSISGSTSGSTSGSTSGSTNGSTIGGTFGSSACGTVGSTSGSTLGSTSGSTLGSTSGSTLGSTSGSTLGSTVGSTIGSTSSSTFGSAISSTIGSISSSTVGTTSVWLKTSGAKLRGITIDSTIGSTSGSATGSTIGSATGSTIGSATGSTIGSATGSTIGSATGSTIGSATGSTIGSATGSTIGSALGEKYSSHRMLRAVKNRFGSTDELGVFGMSHSGLQAISNASEMFLSGQHLDSEILAGLAVAVIMDGSRTFLIEIQALCLSSSIGSRQVNGMVLDAEKKKRLADVLSRRTAGGSGPAGPSSPAVAASEPTTEKSKRAAPVEISEDEDTCSGLVFKRKRVEVAAEVSSATEGQPPSFREHPPSASSPPEPILALEGGGESAPSTSQMPSAPELPPLLQRALAQMPGQAAMEAMDGNSLGDLISHGLGERATNREVQLGKVEEELAQQTELLKKTEAELTEDATDAYGEGFSDALAQFVCVHPEMDLSPFSVTSQVVDGQIVPR 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00254 951 PANTHER DNA REPAIR PROTEIN RADA 632 735 - -
Phco1g00254 951 MobiDBLite consensus disorder prediction 793 840 - -
Phco1g00254 951 MobiDBLite consensus disorder prediction 737 775 - -
Phco1g00254 951 Coils Coil 885 905 - -
Phco1g00254 951 MobiDBLite consensus disorder prediction 488 511 - -
Phco1g00254 951 MobiDBLite consensus disorder prediction 447 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00254 Phco-Chr1 1824862 1833392 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00254 1 1824862 1833392 Phco1g00254 1 1824862 1833392 ECH
Phco10g01857 10 40767084 40769558 Phco1g00254 1 1824862 1833392 PCT