Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00252 ATGTACAGAGCAGCAGCTTCTTCATTCAGAAGGCATCTCAAGGGCGATGGATGTAAGTTGGGATCCACTAGGTCCTCCACTTCAGCCGCCGTAGCTGCAGGGACTGCCCAAGGTGGTTTGTTTAGCTGGCTTACTGGAGAGCGTTCTAGTTCTCTTCCTTCTCTGGATATACCCCTTGCTGGTGTTGCTCTCCCAGATCCACTTCCAGATTCTGTTGAACAAAGCAAGACCAAGATCACAACACTTTCCAATGGACTTAAAATAGCATCAGAGACCTCGCCTAACCCTGCAGCTTCAATCGGGTTATATCTTGACTCTGGTTCCATCTATGAGACATCAATCTCAAGTGGAGCTTCACACTTGCTGGAGCGAATGGCTTTCAAAAGCACAACAAACCGAAGTCACTTTCATATTGTAAGGGAAGTAGAAGCAATTGGTGGTAATATAGGAGCCTCAGCCTCGAGGGAGCAAATGGGATATACATTTGATGCCTTGAAAACCTATGTTCCACAAATGGTGGAACTACTGGTTGACTGTGTAAGGAACCCTGCCTTCTTGGACTGGGAGGTCAATGAAGAGCTTCGGAAAGTGAAAGCAGAGCTTGGAGAACTCTCCAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTACTCTGGTGCATTGGCTTATCCTCTCTTAGCTCCTGAAGCAGCATTGAACAGATTGGATGGCCCTAGTTTAGAGGAATTTGTTGCTGAGAATTACACTGCACCAAGAATGGTACTTGCAGCAGCTGGGGTTGAGCACGAGGAACTTGTATCTATTGCTGAGCCACTTCTCTCTGATCTACCAAATGTTCCCCGTCCTGATGAACCTAAATCTATATATGTTGGAGGTGATTTTCGTCGTCATGGTGAATCAAGGGGTACACATGTTGCTCTTGCTTTTGAAGTGCCTGGTGGATGGCATAAAGAGAAAGATGCTATAGTTTTGACTGTTTTACAGGTGCTTATGGGAGGAGGTGGGTCATTTTCAGCAGGGGGCCCTGGAAAAGGGATGCACTCAAGGCTATATCTTCGTGTGCTGAATGAATATCAACAGATTCAATCCTTTTCTGCATTCAACAGCATTTTCAATAATACAGGATTGTTTGGCATTTATGCAAGCACTAGCCCTGATTTTGCGCCAAAGGCTGTGGATATAGCAGCCAAAGAACTAATAGCAATTGCTTCCCCTGAACAAGTTACACAGGTGGAGCTTGACCGAGCAAAAAAATCCACAAAGTCTGCAGTTCTAATGAATCTGGAATCTAGAATGATTGCATCAGAAGATATTGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCTTTGGAACAATTCCTGAAGGCTGTAGATGAAATCACGTTGAACGATATCACCAAAATTGCCCAGAAGATTATTTCCTCACCTTTGACCATGGCATCATATGGGGATGTCCTTAGTGTGCCCAGTTATGAATCTGTTAACAGCAAGTTCCATGCAAAATGA 1521 0.4477 MYRAAASSFRRHLKGDGCKLGSTRSSTSAAVAAGTAQGGLFSWLTGERSSSLPSLDIPLAGVALPDPLPDSVEQSKTKITTLSNGLKIASETSPNPAASIGLYLDSGSIYETSISSGASHLLERMAFKSTTNRSHFHIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPEAALNRLDGPSLEEFVAENYTAPRMVLAAAGVEHEELVSIAEPLLSDLPNVPRPDEPKSIYVGGDFRRHGESRGTHVALAFEVPGGWHKEKDAIVLTVLQVLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFAPKAVDIAAKELIAIASPEQVTQVELDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKAVDEITLNDITKIAQKIISSPLTMASYGDVLSVPSYESVNSKFHAK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00252 506 Gene3D - 67 279 - -
Phco1g00252 506 FunFam mitochondrial-processing peptidase subunit alpha 291 499 - -
Phco1g00252 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 304 497 IPR011249 GO:0046872
Phco1g00252 506 Gene3D - 291 502 - -
Phco1g00252 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Phco1g00252 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Phco1g00252 506 PANTHER METALLOPROTEASE 70 494 - -
Phco1g00252 506 FunFam Mitochondrial-processing peptidase subunit beta 67 282 - -
Phco1g00252 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Phco1g00252 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00252 Phco-Chr1 1796563 1802552 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00252 1 1796563 1802552 Phco1g00252 1 1796563 1802552 ECH