Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00249 ATGAGTATGAAGTGCCTTGTGTTCTTCGTTGCTACACTTTTGGTGGCATCTCAATGCCATGGCGCTTCCTTCCGAAGCTTCCCTCTCAGCATGACAACAGGTTCTGGCGACGGTGTGAGTGAGACGGAGGTAAGATGCGCCAGTTGGAGGCTTGCGGTGGAAGCACAAAACATCTTCGGCTTTGAAACCATTCCTGAACAGTGCGTGGACGCTACAGCCAACTACATCGAAGGAGGACAATACAGATCAGACTCCAAAACAGTTAACCAACAGGTTTACTTTTTCGCTAGAGATCGCCAAGTCCATGAGAACGATGTAATTCTGTTCAACATAGATGGAACTGTACTCTCCAATGTCCCATACTATTCTCAACATGGATATGGAGTGGAGAAATTCAATTCCGAACTTTATGACGAATTTGTTAACAAGGGTGACGCACCAGCATTGCCTGAGACTCTTAAGAATTACAACAAACTGGTGTCTCTTGGCTACAAGATTATCTTCTTAAGTGGAAGGCTAAAGGACAAAAAAATTGTAACTGAAGCCAACTTAAAGGAGGCTGGTTACCACACATGGGAGAAGTTGATTCTCAAGGACCCATCTAACAGTGCTGAAAATGTAGTTGAATACAAATCAGCTGAGAGAGCGAAGCTGGTGCAGCAGGGTTACAGAATCGTTGGAAATGTTGGAGACCAGTGGAACGATCTGAAAGGAGATAGCAGAGCAGTGCGAAGCTTTAAGCTGCCTAATCCCATGTACTACATTAACTAG 771 0.4475 MSMKCLVFFVATLLVASQCHGASFRSFPLSMTTGSGDGVSETEVRCASWRLAVEAQNIFGFETIPEQCVDATANYIEGGQYRSDSKTVNQQVYFFARDRQVHENDVILFNIDGTVLSNVPYYSQHGYGVEKFNSELYDEFVNKGDAPALPETLKNYNKLVSLGYKIIFLSGRLKDKKIVTEANLKEAGYHTWEKLILKDPSNSAENVVEYKSAERAKLVQQGYRIVGNVGDQWNDLKGDSRAVRSFKLPNPMYYIN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00249 256 PIRSF VSP 1 256 IPR014403 -
Phco1g00249 256 NCBIfam vegetative storage protein 4 252 IPR011267 GO:0045735
Phco1g00249 256 Gene3D - 42 256 IPR023214 -
Phco1g00249 256 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 32 255 IPR005519 -
Phco1g00249 256 CDD HAD_VSP 72 255 - -
Phco1g00249 256 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 6 255 - -
Phco1g00249 256 SUPERFAMILY HAD-like 103 253 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00249 Phco-Chr1 1776401 1777662 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00249 1 1776401 1777662 Phco1g00249 1 1776401 1777662 ECH