Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00229 ATGGACACATTAGGTTTAACTGAACAGCCATATCCTAAGCTCTCTTCAGATGAGATGCTGGAATTGGAAAGAATATACAAAGATATGGGAGAACAACCACTTGATCGGAAGTTGTGTCAGGAGATTGCTAAACGTTTTAGTTCCTTGTCAAATGGTGCTGGTAAAACTCCCTTATCATGGCAACAGGTGGAGCAGTGGTTCAAAAATAGGCAGAGAGTATCACAGAATAAAGATACTTCATCATCCAACCTGCTGCCACTGTCTGCTGATCTTTCAAGTTCAAGAGGTACACAAGCTACTGATATTTCGGATTTGGCATTTGAAGCAAGATCTACAAAAGATATTGCATGGCATGATATTGCATTGTTCCTTAACTACAGAGTTCTGTGCACTGGCGAACTTGAAGTCCGTGTCCGATATGCTGGTTTTGGTAAAGAGCAGGATGAGTGGGTGAACGTGAAACAGGGGGTGCGGGAGAGATCTATACCATTGGCACCTTCAGAATGTAACAAGGTTCAGGATGGAAATCTTGTTCTCTGTTTCTTGGAACGAGACGATTATGCTCTCTATTGTGATGCTCGAGTTGTGAAAATCCAGAGGAGGATACATGATCCAACAGAGTGTACGTGTACCTTCATTGTTCGATTTCTCCATGACCACAGTGAGGAAGGAGTGTCTTGGAATAGGTTATGCTGTAGGCCTACAGAAGAAGAATCTGCTGTCTACCCAATTCTTACCCTTCATTCCACCCAAAGTCCCTCTCCTAATTTCTCCCTAAATCCCATAGAGTCCTTGTGGGGATAA 804 0.4303 MDTLGLTEQPYPKLSSDEMLELERIYKDMGEQPLDRKLCQEIAKRFSSLSNGAGKTPLSWQQVEQWFKNRQRVSQNKDTSSSNLLPLSADLSSSRGTQATDISDLAFEARSTKDIAWHDIALFLNYRVLCTGELEVRVRYAGFGKEQDEWVNVKQGVRERSIPLAPSECNKVQDGNLVLCFLERDDYALYCDARVVKIQRRIHDPTECTCTFIVRFLHDHSEEGVSWNRLCCRPTEEESAVYPILTLHSTQSPSPNFSLNPIESLWG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00229 267 Gene3D - 102 163 - -
Phco1g00229 267 Pfam SAWADEE domain 104 231 IPR032001 GO:0003682
Phco1g00229 267 ProSiteProfiles 'Homeobox' domain profile. 5 77 IPR001356 GO:0003677
Phco1g00229 267 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 14 239 IPR039276 -
Phco1g00229 267 Gene3D - 164 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00229 Phco-Chr1 1621036 1626228 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00229 1 1621036 1626228 Phco1g00229 1 1621036 1626228 ECH