Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00226 ATGGCACCCCATGGAGAGTCTTTGACTTGCTCTTTCTCTAGGAAAAGCAACATGTCAAAGCCACCAAAGCTTGCATCTGAAAACCTTCAACGAACGGTCTCAGACATCTCTTTTGAGCTGACCAAAGAAGAGATCGATGATCTAAAGCTAACACCAATATCTGAGGTTGAGAATGCAAAGTGTGAGTGCTGTGGGATGTGTGAGGAGTGCACACCCGAGTACATAGACCGTGTGCGTGAGAAGTTCAATGGGAAGTGGGTGTGTGGTTTGTGTGCCGAGGCAGTGAAAGAAGAGTTGGAGAAAAATGGAGGAGAAAAAGAAGACGCGTTGAGTGCACACATGAGTGCATGTGTCAGGTTCAACAAATATGGGAGGGCTTTCCCTGTTCTTTTCCAAGCACAGGCCATGAAAGAGATGCTCAAAAAGAGTACTCTAGATGGTAGAAGGGCTAAGTCCATTAGCCCTAGGGACAAAGGAGGACCAAAGAAAGGAGGCATTGCTCGTAGTTCTAGCTGCATTCCAGCACTTACAAGAGAGATCAATGATATCAAAATAGCCAATTAG 564 0.4574 MAPHGESLTCSFSRKSNMSKPPKLASENLQRTVSDISFELTKEEIDDLKLTPISEVENAKCECCGMCEECTPEYIDRVREKFNGKWVCGLCAEAVKEELEKNGGEKEDALSAHMSACVRFNKYGRAFPVLFQAQAMKEMLKKSTLDGRRAKSISPRDKGGPKKGGIARSSSCIPALTREINDIKIAN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00226 187 MobiDBLite consensus disorder prediction 1 26 - -
Phco1g00226 187 MobiDBLite consensus disorder prediction 9 26 - -
Phco1g00226 187 MobiDBLite consensus disorder prediction 142 170 - -
Phco1g00226 187 Pfam Protein of unknown function (DUF1677) 56 142 IPR012876 -
Phco1g00226 187 PANTHER OS01G0745000 PROTEIN 51 179 IPR012876 -
Phco1g00226 187 MobiDBLite consensus disorder prediction 142 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00226 Phco-Chr1 1595574 1596137 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00226 1 1595574 1596137 Phco1g00226 1 1595574 1596137 ECH
Phco10g01876 10 40940920 40941495 Phco1g00226 1 1595574 1596137 PCT