Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00217 ATGGAATCTAGTCGAAGAGCGGTGGAATCGTACTGGCGGTCGCGGTTGATCGATTCAGCTACGTCCGATGAAGATAAAGTCACACCCGTTTACAAATTGGAGGAAATCAGCGAGCTTTTGCGTTCTTCGCATGTTAGTATTGTGAAGGAGATTTCGGAGTTTGTCTTAAAACGTTTGGAACATAAAAGCCCAATTGTGAAACAGAAGGCTTTAAGATTGATAAAGTATGTGGTTGGGAAGTCTGGTGTGGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCGGTTCGTCAGTTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGCTGATGCACTAAATAAGGCTGTGAGAGACACTGCTCACGAGGCTATCTCTGCCATCTTTTCAGAAGAGAATAGTAAGCCAGCACCTGCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATAAAAACTATGAACCGCCACAGGAAGATAAGAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGCGCATCAATTAAGCAAGGGCTTAATAGCTTAACACAGGGACATTCGCTGATGAAAAATGATCCTGGCAGCTACAGAAGTCCAAATCTTCGAAGATCGTTGACCAATGAAACAGAATATGGTAACAGATATGAGCCAGCTTCGTATCATAATGAAGCTCAGAGTAGTTTTGGAGGCTCAAAGAATCAATCCTCTGGTCCTTGGAATCAGGATTCAAGAGTAACCAAGACGGAAACATCAAATGGAGAATCTGGTGCAAGTTGTGTAGAGAGTAAGACAAGAGAGCATAAGTTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGCCTGCAACCCACTCGAGATGCAATTCAAGCTTTCCTAGCAGAGGCTGCAAAGTTGGATGCACTTCCTTTATGTCATGCCCTTGAACTGAAGCTTCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGAATCCATTCTTAGAAAGAAGGATGATGATCATTTTTCACTGGTGGAATCTTACTTCACTGAAAACAAAGATGTGGTGCTGAGATGTTCTGAATCGCCGCAAGTCTCTTTACGGGAAAGGGCTGTGAAGGTTCTTGGTCTTTTAGGTGAAGGCCAGCCAAACAGCTCTGCAATTAATTCAGAGAATGCTGTGAAAACAGAGAATGCTGCTGTTGTGGAGCTTCCTAACTTGATAGACACTGGTGATTCAGATGATTATCACAGAACTGAGGACACTCTAAAGAGTACAACAGATCAAAATATATCAACTTTGACATCCACACCTCTGGTTGATGATTTATTTGGAGATTTCAGCAGCTCTATTGGAGCTAGTCAAGAAATAAAAAATGAGGATGATCCATTTGCTGATGTTTCATTTCATACAAGTGAGAACAAGGACCATGCTGATGATCTCTTTTCTGGGATGACTGTTGGCAGTGATAAACAGAGCAATCATGGGAGTCACAGGCAGGGGAATATCAGTGATCCTCAACTTTTTGACATTTTTACTTCCAATTCTGAGCAGGGAAACCATAAGGAGCTTGTTACTGATTTAATGGCCGGTCTATCAATGGAGGAAAATACCTCAAGTACGAAGCACACGGGAACATCTTCCATGCAATCTGAATCTTTATTTTCAGGCTTAACTGACCATATTCCTTCAGATGGCATGTTGAGCTCTCAGCCAACGGGGTTGAATGTAAATCCCATTTTTCCTACTGGTGCTCTGCCTTTTAACATGCAGCCTGGTTTCATGTTGAACCAACCTTATTCTTCCCAGCCTCTTAATTACGGTGCCATGGGAACTCTTTTGGCTCAACAGCAATTCTTAGCAACAATGGCTAATTTCCAACACCTTAATAATATCAACATGCGAGATGATGGTGTTACTCAAATGGCTGGACCCAATGGAAGAACACCTTTGCCAGACATATTTCAACCAAGTTTTCAAACTCAAACTCCTAGCTCAATGATCAACACCTCGAGGAAAGAAGAAACTAAAGCATTTGACTTTATCTCTGACCATATGACCTCTACTCGTGATTCAAGGAGAATGATTTAA 2085 0.4216 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEISELLRSSHVSIVKEISEFVLKRLEHKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKADALNKAVRDTAHEAISAIFSEENSKPAPAEDLNRRIQGFGNKNYEPPQEDKKSFISEVVGIGSASIKQGLNSLTQGHSLMKNDPGSYRSPNLRRSLTNETEYGNRYEPASYHNEAQSSFGGSKNQSSGPWNQDSRVTKTETSNGESGASCVESKTREHKLLETIVTSGGVRLQPTRDAIQAFLAEAAKLDALPLCHALELKLQSPIWQVRMKAVCVLESILRKKDDDHFSLVESYFTENKDVVLRCSESPQVSLRERAVKVLGLLGEGQPNSSAINSENAVKTENAAVVELPNLIDTGDSDDYHRTEDTLKSTTDQNISTLTSTPLVDDLFGDFSSSIGASQEIKNEDDPFADVSFHTSENKDHADDLFSGMTVGSDKQSNHGSHRQGNISDPQLFDIFTSNSEQGNHKELVTDLMAGLSMEENTSSTKHTGTSSMQSESLFSGLTDHIPSDGMLSSQPTGLNVNPIFPTGALPFNMQPGFMLNQPYSSQPLNYGAMGTLLAQQQFLATMANFQHLNNINMRDDGVTQMAGPNGRTPLPDIFQPSFQTQTPSSMINTSRKEETKAFDFISDHMTSTRDSRRMI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00217 694 PANTHER UNCHARACTERIZED 5 684 IPR039273 -
Phco1g00217 694 MobiDBLite consensus disorder prediction 186 205 - -
Phco1g00217 694 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Phco1g00217 694 MobiDBLite consensus disorder prediction 223 261 - -
Phco1g00217 694 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Phco1g00217 694 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Phco1g00217 694 SUPERFAMILY ARM repeat 36 390 IPR016024 -
Phco1g00217 694 MobiDBLite consensus disorder prediction 223 265 - -
Phco1g00217 694 Gene3D - 2 139 IPR008942 -
Phco1g00217 694 Pfam ENTH domain 16 129 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00217 Phco-Chr1 1512478 1516369 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00217 1 1512478 1516369 Phco1g00217 1 1512478 1516369 ECH