Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00204 ATGATTTGCGATATCTTTATTATGTCAATCCTTAACGTATATGGTATACATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTATACAGGTTCCTCGGTTGAGTTTTTGCCAAAATTTAGTGTGAGGGGAGTTTGGCAGAGATGGCGTGAATCTTATCCAACTGATGGTTCTAAGGCCGATGATGCTATAACTGTATTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATAATGCAATGGATCCTGAGCTTCAACATGTTTCAGCGTCTGCTGCAAATAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCAAATCCATTGAAAGGTGAGCGCAAGCCAGGAACTGTGGGCAAACCATTTCCCGGTATACAGGTCAAGATTATTGCAGATGAAGAGAGTGAGAATGACAATACTGGAATGGGTGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACGAAGGAATCATTTACTGATGATGGATTCTTTAAGACTGGAGATGCAGTTTCTACAGATGAAGATGGTTATTACATCATTTTAGGACGTACTAATGCCGATATAATCAAGGCTGGTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTTATCATAGAGCATCCAGCTGTCTCAGAATGTGTCATTTTAGGATTACCAGACAAAGACTATGGAGAGATTGTTGGTGCAGTCATTGTGCCACATGCTGATGTTAAAGAAAAGCGAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTAAACTAATCCTGTGGGAGAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAAGTGGTGGTTTCAGAACAGTGA 1029 0.4111 MICDIFIMSILNVYGIHVHGFFNGLMAPLYTGSSVEFLPKFSVRGVWQRWRESYPTDGSKADDAITVFTGVPTIYARLIQGYNAMDPELQHVSASAANNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEESENDNTGMGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVSTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECVILGLPDKDYGEIVGAVIVPHADVKEKRDQESKPVLSLEELSTWAKDKIAPYKIPTKLILWEKLPRNAMGKVNKKELKKVVVSEQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00204 342 Gene3D - 229 341 IPR045851 -
Phco1g00204 342 Pfam AMP-binding enzyme 17 232 IPR000873 -
Phco1g00204 342 Gene3D - 6 226 IPR042099 -
Phco1g00204 342 Pfam AMP-binding enzyme C-terminal domain 243 328 IPR025110 -
Phco1g00204 342 CDD MCS 17 336 - -
Phco1g00204 342 PANTHER ACYL-COA SYNTHETASE 17 337 - -
Phco1g00204 342 SUPERFAMILY Acetyl-CoA synthetase-like 17 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00204 Phco-Chr1 1437547 1440955 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00204 1 1437547 1440955 Phco1g00204 1 1437547 1440955 ECH