Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00188 ATGGATTTTTGGCCAGAATTTCTTGCAAGCAGTTCGGGAAGAGAGTTTGTAGCAGGTGGGTTTGGAGGCATCGCTGGTATAATTTCAGGTTATCCACTTGACACTGTCCGCATCAGATTACAGAACACAAAAAATGGCTCTGCTTTCGCCATCTTTAGGCACATGGTGTTTAGGGAAGGACCAACTTCTTTGTACCGCGGCATGGCCGCACCATTAGCCTCTGTTACTTTTCAGAATGCAATGGTTTTCCAAACGTACGCGGTTCTGTCAAGGGCATTTGACACACCCGTTTCTCCTAAAGACCCTGCATCCTACAAGGGTGTTGCATTAGGAGGAACTGGTACTGGGGCACTCCAAAGTCTATTGCTTTCCCCTGTAGAGTTGATCAAAATTCGACTTCAGCTGCTGAAGGAAGGGCACATGACAGAAGCCACAAAAGGTCCTATGAAGCTGGCTAAAAAGCTTTGGAGAAAAGAAGGCCTTCGAGGCATTTATCGAGGACTTGGTGTCACTGTGATGAGGGATGGACCCTCTCATGGTTTATACTTCTGGACTTATGAATACATGAGGGAACGATTTCACCCTGGTTGCAGAAAAAGTGGTGAAGAAAGTTTGAAGACTATGTTAGTAGCTGGAGGATTAGCAGGGGTGGCTAGTTGGATTAGTTGCTACCCTTTTGATGTTGTAAAGACTAGACTTCAGGCTCAAACACCCTCTTCTCTCAAGTACAAAGGCATCGTAGATTGTTTCAAAAAGAGTGTTAAAGAAGAAGGATACAGTGTTCTATGGCGGGGTTTAGGAACTGCAATTACCAGAGCTTTCCTCGTAAATGGGGTCATATTTTCTGCTTATGAGATTACACTAAGATTACTGTTTAACAACGGAAGCATTCATATGAAAGAAACTCTTTAG 912 0.4408 MDFWPEFLASSSGREFVAGGFGGIAGIISGYPLDTVRIRLQNTKNGSAFAIFRHMVFREGPTSLYRGMAAPLASVTFQNAMVFQTYAVLSRAFDTPVSPKDPASYKGVALGGTGTGALQSLLLSPVELIKIRLQLLKEGHMTEATKGPMKLAKKLWRKEGLRGIYRGLGVTVMRDGPSHGLYFWTYEYMRERFHPGCRKSGEESLKTMLVAGGLAGVASWISCYPFDVVKTRLQAQTPSSLKYKGIVDCFKKSVKEEGYSVLWRGLGTAITRAFLVNGVIFSAYEITLRLLFNNGSIHMKETL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00188 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Phco1g00188 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Phco1g00188 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 291 - -
Phco1g00188 303 FunFam Mitochondrial arginine transporter BAC2 11 301 - -
Phco1g00188 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Phco1g00188 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Phco1g00188 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Phco1g00188 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Phco1g00188 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Phco1g00188 303 Gene3D Mitochondrial carrier domain 14 298 IPR023395 -
Phco1g00188 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Phco1g00188 303 Pfam Mitochondrial carrier protein 12 93 IPR018108 -
Phco1g00188 303 Pfam Mitochondrial carrier protein 208 294 IPR018108 -
Phco1g00188 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00188 Phco-Chr1 1334363 1335426 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00188 1 1334363 1335426 Phco1g00188 1 1334363 1335426 ECH