Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00184 ATGTTTCGGTGGCTATTGAAGCCCAGCTTGTCTTACCTGAAGTCTTTGAAGATTCGGCTGGGGAGAGTACAGAATAGGAAGAAAGCACAAGTGAAGTTTTTGAAGAGTGACATCGCCGAGCTTCTCACGATTGGCCTTGAATACGATGCATATACAAGGGCTAAGGTGCTTCTGTTAGAGCAGAAAAAGTTATCCTCCTATGAACTCATTGAAAACTTTGTTGGGTGCATATCAGATCATGTTGAAGACCTTACAAAGCAGAAGGATTGCCCTGATGAATGCAAGGAAGCTGTGTCATCATTGATGCATGCTGCTGCAAGAACTGGTGATCTGCCAGAATTGCGTGAGCTCAGAACATTATTCACCGACAAATATGGGAATTCTCTTGAACCTTATATAAACAAAGAGCTTGCTAAGAGTCTGAGAGAAGATCCACCTACAAGAGAAATTGAGATTGGACTATTACATGATATAGTACAAGAGTTTTCCATAGAATGGAATGACAAGTCTTTGAGAGAAAGACTTTATCCACAGTCGTCATTACGTGAAGAGAAGCCTATTGCTGGAGAAGACTTCAATACACCAAAAGGAAAGGAAAGAGACACCCAACATCTAGGAAGGAAGGATTTGAGTGGTGACAGATGGATGCATCAAAACAGTAGCAGTGATGATGAAACAAGTCTGTCATCACATGATGGCCGAAAGGGTAGAAGTTCAAGTTCATGGGGAAGCATATCTGAGGATGAAGTTGAAACCAACATGCCAATTTCTTCCTATTGGGGCATTCCACCTCCGTACCTCAAACAAAAGACCAACAAAAGTGATTCAAAGAAAACAACACATGCTGACACTGCAACACCACCAGATCCAGGTGGAATGAAATCAGGCAAAGGAAAGTGTTATCCTTCTCCACAACCAGAACATGGTACCGGGCAAATCAGAAGGCGTACAAGCTCACATGTCAGAGGTAAATCTGTTCCCTCTGAACCCAACACTGCAGAGGAAACATCAAAAGGGCATATACGAACAGTTTCCTTAGAATCGGGAATGCGGGGTGGTGCATGGCATGTGCATCCGAATCTACCCGATTATGATGATTTGAGAGCTCGTCTGTTAGCTCTCCGAAAGAGATAA 1134 0.4303 MFRWLLKPSLSYLKSLKIRLGRVQNRKKAQVKFLKSDIAELLTIGLEYDAYTRAKVLLLEQKKLSSYELIENFVGCISDHVEDLTKQKDCPDECKEAVSSLMHAAARTGDLPELRELRTLFTDKYGNSLEPYINKELAKSLREDPPTREIEIGLLHDIVQEFSIEWNDKSLRERLYPQSSLREEKPIAGEDFNTPKGKERDTQHLGRKDLSGDRWMHQNSSSDDETSLSSHDGRKGRSSSSWGSISEDEVETNMPISSYWGIPPPYLKQKTNKSDSKKTTHADTATPPDPGGMKSGKGKCYPSPQPEHGTGQIRRRTSSHVRGKSVPSEPNTAEETSKGHIRTVSLESGMRGGAWHVHPNLPDYDDLRARLLALRKR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00184 377 MobiDBLite consensus disorder prediction 323 343 - -
Phco1g00184 377 Gene3D - 8 174 IPR042277 -
Phco1g00184 377 FunFam Vacuolar protein sorting-associated protein IST1 7 174 - -
Phco1g00184 377 PANTHER IST1 FAMILY MEMBER 13 376 IPR005061 GO:0015031
Phco1g00184 377 MobiDBLite consensus disorder prediction 185 220 - -
Phco1g00184 377 MobiDBLite consensus disorder prediction 185 345 - -
Phco1g00184 377 MobiDBLite consensus disorder prediction 233 253 - -
Phco1g00184 377 Pfam Regulator of Vps4 activity in the MVB pathway 13 164 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00184 Phco-Chr1 1315681 1317972 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00184 1 1315681 1317972 Phco1g00184 1 1315681 1317972 ECH