Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00172 ATGGCTACCCCGGTTGAAGAAAACAACGTTGAGTATGATAGTGATCCCGAAGAGGCAACGAGACCGTTAACAATGCGGAGGCGCGAAGCAAGCGATGACGAAGAAGCCGAAGGGGAAGAAGTCACTGATAAGAGGGAAGGTGGTAGAGTAGAGGTTCATTCTAATGACTTAGATGATGAAGGAGGTGTTGAAGATTATGCGGATGATGGTGATGATGTTGAAGAAGCCGAAGAAGAATTGCAAGAAGAAGAAGAGGAAGTTGAAGAAGTGTACGAGGAGAAGGGTGCAAGTGGTGGGGTTGAGGTTGAGGGTTCCGTGGTTGTGTCTAAGGAATCTGATGATGATGTCAGACCCCCTTTGGAAGATTCCGTTGAGGACCATTCGGAGGAGAAAAAGGAGTCTGATCCATTTGCGGTGCCCACAGCCGGAGCTTTTTACATGCACGATGACCGATTTAGGGACAATGCTGGTACCCGCAACAGATGGATACGTGGTGGTGGAAGGAGACTGTGGGAGTCCAAAGATGACAAGAAATGGGGACATGATAAATTTGAGCAAATTTTGCACGAAAGGCATTATGAGGAGAGGAGACCTTATAAGGGTAATTATCGTGGCCGTGGTAATGGTCGAGGCACTGAAGGAAGTAGGAAAGGGTATAATAGCAGTAGCAATCAAAATCAGATGCCTAAGAGTGTTGTGAGAGGAAGAGGCCCCCAAAGGTATGAACGTACCAACAAAATCAATGGTCCATCTCCCCAAGTGCAAAATAAACGATCTGGGAAATCTCGTGAGAAAAATTCAAATGTTAGTTTTGAGAGGACTTCCACACCTTCCCATGCAGAATCTGACTCTGTGCCTGGTAAAAATCAAGTGCTTGCTTCAAATTTGAATTCAGCTTCCCCACCATATTACCCCTCTGGCTCTTCCAGCAATGATATTAATTTGACACAAAAAAGGGAGGTGCAAACGGGTGGCAGAAACATTGGTCCTGTTATGGAAGAGGGTTTTCCAGTTCGACAAAAGAATGCTCTGATTCAGGGAAAGAATGATGTTGATTCCGTCAGCATGGCAAAGTTGTATATTAATGAATCCATCCCTCAATCTGTTGGGAAGCCTTCGAACAATGTGCGTATGGCACGACCTGGGTCTTCTGGAGTCGATGCTTCTCAATCTCCTCACCTAAAGGCTTCTGGGAATGGGAGGGGTGTATCAATCCCAGTACAGACAAATTTTCAGCATGCTCCCTCACATAATAAAGTTTCTCCATCACAATTCCAGGCTATTCAGACAAGTTCTGTTCCAGGGAGGAATTCAACTTCTGTGCAAGCTACTGCCCCACAGTTGGGCCAAAGACCTGGCAGTGAGTCTCCATTGTCTTCCCCCTCCAGAAAATCCATGCCAACTAATTCACATGATTCTGGGGAATTGGATTCAGCGTCAGAATCAGGTAAAGGCAAAGGAGCTTTGGTTGGGAAGGGAAGGGGAGGTTCCCATGGCGCAGGACAGGGAACTTTTGTTTATGGTGGGGCACAAGTAATAGGCACCGCTGGCAATGTAGGTGTTAGCCATGGAGATCCAAACTTCCCTGCCTTCTTGCCAGTCATGCAATTTGGGGGCCAGCATCCTGGTGGTATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAACCTCAACTGGGAAAGTCAGAAATGACATGGCTACCAGTCTTGGCTGGTACTGCAGGAGCTTTAGGGGCTACATACCCATACCTTGCTGTTGATGGTGCAAGCAGTCACCAATCTGGACAGGCCTCTGCAATGGGTACTTCAAGCAAGGACCATAGTGTTAACAAAGCTAATAATGAATTGAAGCCACCTCAGAGATCTGAGCTTTCAAGTGAAGAGTTTGGACAAAGGCATAATAAACCCCGAAGATACTCAGAGATGAATTTTGGTCAACAGGCCTTTCTCCTGGCCCTTAGTCCTCTAGCTTTTAATCTGGAGCACTTTGGGCTGCCTTATATAACACCTGCTCTTGCTGTTCCCATCGTAGAAGTTCTTGCTAATTTGGAAGGTTCTTCTGGCGGTTTGGTTTCTTAG 2091 0.4663 MATPVEENNVEYDSDPEEATRPLTMRRREASDDEEAEGEEVTDKREGGRVEVHSNDLDDEGGVEDYADDGDDVEEAEEELQEEEEEVEEVYEEKGASGGVEVEGSVVVSKESDDDVRPPLEDSVEDHSEEKKESDPFAVPTAGAFYMHDDRFRDNAGTRNRWIRGGGRRLWESKDDKKWGHDKFEQILHERHYEERRPYKGNYRGRGNGRGTEGSRKGYNSSSNQNQMPKSVVRGRGPQRYERTNKINGPSPQVQNKRSGKSREKNSNVSFERTSTPSHAESDSVPGKNQVLASNLNSASPPYYPSGSSSNDINLTQKREVQTGGRNIGPVMEEGFPVRQKNALIQGKNDVDSVSMAKLYINESIPQSVGKPSNNVRMARPGSSGVDASQSPHLKASGNGRGVSIPVQTNFQHAPSHNKVSPSQFQAIQTSSVPGRNSTSVQATAPQLGQRPGSESPLSSPSRKSMPTNSHDSGELDSASESGKGKGALVGKGRGGSHGAGQGTFVYGGAQVIGTAGNVGVSHGDPNFPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGKSEMTWLPVLAGTAGALGATYPYLAVDGASSHQSGQASAMGTSSKDHSVNKANNELKPPQRSELSSEEFGQRHNKPRRYSEMNFGQQAFLLALSPLAFNLEHFGLPYITPALAVPIVEVLANLEGSSGGLVS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00172 696 MobiDBLite consensus disorder prediction 41 60 - -
Phco1g00172 696 SMART Btz_2 106 209 IPR018545 GO:0003729|GO:0006397|GO:0035145
Phco1g00172 696 MobiDBLite consensus disorder prediction 107 136 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 14 33 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 366 497 - -
Phco1g00172 696 Coils Coil 63 97 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 598 624 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 61 91 - -
Phco1g00172 696 Pfam CASC3/Barentsz eIF4AIII binding 125 206 IPR018545 GO:0003729|GO:0006397|GO:0035145
Phco1g00172 696 MobiDBLite consensus disorder prediction 269 323 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 1 333 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 214 232 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 598 637 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 366 476 - -
Phco1g00172 696 MobiDBLite consensus disorder prediction 165 202 - -
Phco1g00172 696 PANTHER PROTEIN MLN51 HOMOLOG 1 650 IPR044796 GO:0003729|GO:0006397|GO:0035145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00172 1 1242418 1247236 Phco1g00172 1 1242418 1247236 ECH