Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00171 ATGGAGGATTGCAACAACAAAGGAGAAGTTCATGCAAATTTTACAAAGCAGAAGAACTCTTCAGCAAGATCAGGTATCAGTTTGAAATCTATTTCATCTGGAAGGTCAAGTCCACAAAATTCTCCTTCATTTCAGCGACCACATTCTACCTTAACACCAAGAAGAGAAGGCAAGGGTGTTGCACAGTGCTACGGGAGCAACCGGTTACTGTTATGGCTGCTTGTGATAACCCTTTGGGCTTATCTTGGATTTTGTGTTCAGTCTAGGTGGGCACATGATGATAAGGAGGGGGAATTTTCAGGGTTTAAAAGCAGGCCAAGTGATGCAACAAACTCATATGTTGAACAGAATCAGCATCATGATTTGATTGCCAAAAACATTTCCTTATCTGTTAACATTGAACAAGTTGGAAACCAAACAATGGATGTGGCTTTGGCCAAGAAAGAATATGGTGTTCTATCTCCAGTTAAATCAAGCTCAAGGAAAAGGAGAAGGCGACCAGTCCAAGGTAAGAGGAGGCGAAAACATAAACTTGAGACCAGTGATTTAGAGGAGCTGGAGCCAGAGATTCCCCCAAGGAATTCTACCTACGGATTCCTTGTTGGTCCATTTGGTTCTTTAGAGGATAGAATTCTGAAATGGAGTCCTCAGAGGCGTTATGAAACCTGTGACACGAGAGGGGACTTTGCACGCCTTGTTTGGTCAAGAAAGTTTGTTTTGATCTTTCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTCTTGAGTTGTGAGGCTTCTGTTTATGCTGTGGTGCTTAGCAGGAAGGGTGGTTTGATGCAAGAACTCGCTAGGAGACATATCAAGGTGCTTGATGACAAAGCATATCTCAGCTTCAAAACTGCAGCCAAAGCAGATCTTGTCATTGCTGGATCAGCTGTCTGTGCATCATGGATTGAACAATACATTGAACGTTTTCCCGCTGGAGCAAGTAAAGTTGCCTGGTGGATTATGGAAAACAGACGAGAGTACTTTGATCGTGCAAAGGATGTGTTGCACAGAGTGAAAATATTGATTTTTCTCTCTGAAGCACAATCTAAGCAATGGCAAAAATGGTGTGAAGAAGAAAGCATAAAATTGAGATTACAGCCAGCACTTGTTCCACTGTCTGTCAATGATGAACTAGCTTTTGTAGCAGGCATTCCCTCTACACTCAATGCTCCATCCTTCGGTGCTGAAAAAATGGATGAGCGGAGGAAGTTGTTGAGAGATTCAGTTCGAAGAGAAATGGGGTTAAGTGATAATGATATGCTTGTGATGACTCTGAGTAGCATCAACCGTGGGAAGGGTCAGCTTTTTCTTCTTGAATCAGCAAGATCAATTGTAGAAGACAAACCATTTCACCATGATAATAAGAAAAGGGCAGTGTTATCAGATGATGGAGAGTACCTATCTACCTTGTCTAGAAGACATCATGTTAGAAAATTGTTCGAGAATAGTAGTGTAGCCTTCAACAATATCTCAAGTACATTTATAAACAGCAAGGAAGTGTTCTCCCACAACAATGGAACAACGGCACAATCTCTCAAAATTCTCATTGGTTCTGTGGGATCTAAGAGCAACAAAGTGGATTATGTTAAAGGTCTTCTAAGATTTTTAGCGCAGCATTCAAACTTGTCAAAGTCAGTTTTGTGGACCTCAGCCACTACACGTGTTGCCTCACTTTATTCTGCTGCAGATGTTTATGTCACAAACTCTCAGGGATTGGGAGAAACATTTGGACGAGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTGCTTGGAACAGATGCTGGAGGAACGCAAGAAATTGTTGAACATAATGTGACAGGTCTCCTTCATCCTATTGGACGCACAGGGAATCATGTCCTTGCACAGCATCTCCGGTTTTTACTTGAAAACAGCTTTGCAAGAGAGAAAATGGGGATGGAAGGAAGAAAAAAGGTGCAGAGGATGTTCTTGAAGCAGAACATGTATGAGAAATTTGTTGATGTTCTTGTCATTTGCATGAGAACCAAATAA 2064 0.4181 MEDCNNKGEVHANFTKQKNSSARSGISLKSISSGRSSPQNSPSFQRPHSTLTPRREGKGVAQCYGSNRLLLWLLVITLWAYLGFCVQSRWAHDDKEGEFSGFKSRPSDATNSYVEQNQHHDLIAKNISLSVNIEQVGNQTMDVALAKKEYGVLSPVKSSSRKRRRRPVQGKRRRKHKLETSDLEELEPEIPPRNSTYGFLVGPFGSLEDRILKWSPQRRYETCDTRGDFARLVWSRKFVLIFHELSMTGAPLSMMELATELLSCEASVYAVVLSRKGGLMQELARRHIKVLDDKAYLSFKTAAKADLVIAGSAVCASWIEQYIERFPAGASKVAWWIMENRREYFDRAKDVLHRVKILIFLSEAQSKQWQKWCEEESIKLRLQPALVPLSVNDELAFVAGIPSTLNAPSFGAEKMDERRKLLRDSVRREMGLSDNDMLVMTLSSINRGKGQLFLLESARSIVEDKPFHHDNKKRAVLSDDGEYLSTLSRRHHVRKLFENSSVAFNNISSTFINSKEVFSHNNGTTAQSLKILIGSVGSKSNKVDYVKGLLRFLAQHSNLSKSVLWTSATTRVASLYSAADVYVTNSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRTGNHVLAQHLRFLLENSFAREKMGMEGRKKVQRMFLKQNMYEKFVDVLVICMRTK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00171 687 Pfam Glycosyl-transferase family 4 234 403 IPR041693 -
Phco1g00171 687 MobiDBLite consensus disorder prediction 10 50 - -
Phco1g00171 687 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 245 679 - -
Phco1g00171 687 MobiDBLite consensus disorder prediction 158 174 - -
Phco1g00171 687 Pfam Glycosyl transferases group 1 550 661 IPR001296 GO:0016757
Phco1g00171 687 CDD GT4_PimA-like 237 680 - -
Phco1g00171 687 MobiDBLite consensus disorder prediction 1 57 - -
Phco1g00171 687 MobiDBLite consensus disorder prediction 155 187 - -
Phco1g00171 687 Gene3D Glycogen Phosphorylase B; 411 667 - -
Phco1g00171 687 PANTHER BNAA05G14870D PROTEIN 1 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00171 Phco-Chr1 1237474 1240709 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00171 1 1237474 1240709 Phco1g00171 1 1237474 1240709 ECH
Phco10g01938 10 41329555 41333045 Phco1g00171 1 1237474 1240709 PCT