Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00163 ATGCCTTCACTCTCAGAAGCCTTTCAAGCTCACCCTGTCTATCTTCACCACAAGCACCCTGACTTCAACTCTCTGCAAGAACAACTCCCCGACTCTTACGCATGGACACAACCAGATTCTGATCATCATTCCAATAACACCACCACCAGCACTGTCCCTGTCATCGATTTCAAGGACCCCAATGCTTCAAACCTCATAGGGCATGCATGCAAAACATGGGGCGTCTTCCAACTGGTGAACCATGGCATCCCCATGAACCTCTTCACTGACATTCAGACAGCTTGCCTTGCCTTGTTCTCTCTTCCTCTTCACCAAAAGCTCAAAGCTGCTCGCTCCCCCGACGGCGTCTCTGGCTATGGCCGCGCCCGCATCTCCTCCTTCTTCCCCAAACTCATGTGGTCTGAGTGCTTCACCATTCTCGATTCCCCTCTCCACCTTTTTCTCCAACTCTGGCCCCAAGACTATGCTAAATACTGTGAGATTGTGAAGGAATATGAAGCAGCCATGAAAAAACTGGCAGCGAAGCTAATGTGCCTTGTGTTGGCTTCCCTTGGTATTTCAAAGGAAGATATTAAATGGGCCGGGCCGAGAGGAGAGTTCAACGGGGCTTGCGCGGCCTTACATTTGAATTCTTACCCGAGTTGCCCGGATCCCGATCGGGCCATGGGTCTGGCGGCCCACACGGACTCCACGCTGCTCACAATTCTGCACCAAAACAACGTGAGTGGGCTTCAGGTTCTGAAGGACGGTGAAGGGTGGGTGGCGCTACCGCCGCTTGCGGGAGGGCTGGTGATTAACATTGGCGATCTGCTCCACATTTTGTCAAACGGGTTGTACCCGAGTGTGCTCCATCGGGTGCGGGTGAACCGGAGCTGGCAAAGGTTCTCAGTTGCTTATCTATATGGGCCCCCAACAAACGTGGAGATCAGTCCAAATGAAAAATTGGTAGGCCCAGGTAGGCCCTGTCTTTATCGATCGGTGACTTGGAATGAGTACCTTGGCAAAAAAGCAAAGCATTTCAATAAGGCTCTCTCTGCAGTTAGGGTTTCTTCGTCTATTAACGGTTTATTTGATGTAAGGGAGGATCAGAACAACGACTTTCAAGTGGGCTAG 1113 0.513 MPSLSEAFQAHPVYLHHKHPDFNSLQEQLPDSYAWTQPDSDHHSNNTTTSTVPVIDFKDPNASNLIGHACKTWGVFQLVNHGIPMNLFTDIQTACLALFSLPLHQKLKAARSPDGVSGYGRARISSFFPKLMWSECFTILDSPLHLFLQLWPQDYAKYCEIVKEYEAAMKKLAAKLMCLVLASLGISKEDIKWAGPRGEFNGACAALHLNSYPSCPDPDRAMGLAAHTDSTLLTILHQNNVSGLQVLKDGEGWVALPPLAGGLVINIGDLLHILSNGLYPSVLHRVRVNRSWQRFSVAYLYGPPTNVEISPNEKLVGPGRPCLYRSVTWNEYLGKKAKHFNKALSAVRVSSSINGLFDVREDQNNDFQVG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00163 370 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 303 IPR005123 -
Phco1g00163 370 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 52 335 - -
Phco1g00163 370 Gene3D - 22 343 IPR027443 -
Phco1g00163 370 PRINTS Isopenicillin N synthase signature 66 83 - -
Phco1g00163 370 PRINTS Isopenicillin N synthase signature 263 289 - -
Phco1g00163 370 FunFam Gibberellin 3-beta-dioxygenase 1 16 335 - -
Phco1g00163 370 Pfam 2OG-Fe(II) oxygenase superfamily 207 303 IPR044861 -
Phco1g00163 370 Pfam non-haem dioxygenase in morphine synthesis N-terminal 52 142 IPR026992 -
Phco1g00163 370 SUPERFAMILY Clavaminate synthase-like 26 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00163 Phco-Chr1 1145966 1147742 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00163 1 1145966 1147742 Phco1g00163 1 1145966 1147742 ECH