Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00162 ATGGGTTCAGAAGACACTCCAAAGCTTCCAGTAATCAACTTTACCGACCTCAAACTGGAAGCCAAGGATCCTAATTGGGAGGCAGTAAAGTCCCAAGTCCACAAGGCACTTGTAGAGTTTGGTTGCTTTGAAGCAGTTTTTGATAGAGTTCCTTTAGACCTTCGAAAAGCCCTTTTTGGTTCACTTCATGAACTCTTTGATCTCCCTCTACAAACAAAGCTACTCAATGTGTCTAAGAAGCCTTATCATGGTTATGTTGGGCAATATCCTATGGTTCCACTTTATGAAAGCATGGGCATTGATGATGCAATTGTGTATGAGAAAGTAGAAAGCTTGACCAACATCATGTGGCCTAATGGAAACCCAAGTTTTAGCAAAACTATACAATCTTTCTCTGTGGAGCTATCAGAGTTGGATCAGATTATTAGGAAGATGGTTTTGGAGAGCTTGGGTGTTGAGAAGTACTTGGAGGAGCACATGAGCTCAACCGATTATCTCCTAAGGGTTATGAAATACAAAGGCCCTCAAACCAGTGACACAAGGCTAGGCCTCAGCACACACACAGACAAGAACATAGTGACCATATTGTACCAAAATGAAGTGGAGGGTTTAGAGGTGTTGACAAAAGATGGAACATGGATAAGCTACAAGCCTTCCCCTCACAGTTTTGTTGCCATGATTGGTGACTCTCTCCATGCATGGTCAAATGGGAGGTTGCATTCACCCTTTCACAGAGTGATGATAAGTGGAAATGAGGCAAGATACTCTGCAGGGTTGTTCTCTGTCCCCAAAGGAGGGAGCATAATAAAAGCCCCAGAGGAGCTGGTGGATGAGGAACACCCTCTGCTTTTCAAACCCTTTGATCATATGGAGTTTCTCAAGTATTACTACACTGAAAAAGGACAGAGGGATCAGTTTGCACTGCTCACTTACTGTGGTGTTTGA 945 0.4328 MGSEDTPKLPVINFTDLKLEAKDPNWEAVKSQVHKALVEFGCFEAVFDRVPLDLRKALFGSLHELFDLPLQTKLLNVSKKPYHGYVGQYPMVPLYESMGIDDAIVYEKVESLTNIMWPNGNPSFSKTIQSFSVELSELDQIIRKMVLESLGVEKYLEEHMSSTDYLLRVMKYKGPQTSDTRLGLSTHTDKNIVTILYQNEVEGLEVLTKDGTWISYKPSPHSFVAMIGDSLHAWSNGRLHSPFHRVMISGNEARYSAGLFSVPKGGSIIKAPEELVDEEHPLLFKPFDHMEFLKYYYTEKGQRDQFALLTYCGV 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00162 314 Gene3D - 7 310 IPR027443 -
Phco1g00162 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Phco1g00162 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 294 - -
Phco1g00162 314 SUPERFAMILY Clavaminate synthase-like 5 301 - -
Phco1g00162 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 263 IPR005123 -
Phco1g00162 314 Pfam 2OG-Fe(II) oxygenase superfamily 169 260 IPR044861 -
Phco1g00162 314 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 301 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco1g00162 Phco-Chr1 1137492 1138670 Tandem
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00162 1 1137492 1138670 Phco1g00162 1 1137492 1138670 ECH