Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00143 ATGTCAATGTGGAGCAACCTACCCTTCGATCTCTTGGCCAAAATCTTCTCCTTTCTCTCCCCAGACTCACTGGCCACAGCAAGATCAGCTTGCAAGAATTGGCACACTTGTTCCAAAGCATATCCTCTATCCCCACCAACAACAACCTCTTCATGGTTCTTGGCTCTTCCAATTCGCAACCATAGAGCATCTTGTTATGCTCGCAATCCCACCATAGACAAATGGCACCAACTCTCTCTGCCACTCCCATCAATTCGACCAATAGCTTCAATAGGAAGCCTCCTCCTCTTGAGGGTCACCAATTCCACAATCCTCCAACTGGGTCTCTGCAACCCCTTCACCGGAGAGTTCAAGCACCTTCCCCGGCTGCACGCTGCAAGGACCAAACCGGCCGTTGGAGTCACAGTCTCGGATTCATCGCATGATGATGTTCTGTTCCCTCCGTTTAGAGTGTACGTGGCAGGTGGCATGTCGGAGGCGGCGCAAGGCGGCGCCACGTATGAAACGAAGGTGGAGATGTACGACTCAAGGGTTGACACGTGGCGGATTGTGGGGTCGACGCCTATGGAGTTAGCTGTTAGACTGACGGTGTGGACGCCGAATGAGAATGTGTGCATTGGAGAAACTTTGTACTGGGTAACCTCTGCTAGAGCCTACAGTGTTATGGGATATGATGTTGGTAGAAATGGGTGGAGGGAATTGGGGGTGCCCATGGCTGAGAAGCTGGAGTTTGCTTGCCTTGTGAAGAGAAATGGGGCATTGGGATTGGTGGGTGGAACTTGTGGTGGTGGTGGTGGCTGCATTTGGGGGCTGAGTGAAGGGGAGAAGTGGTGTTTGGTGGATAAGGTGCCAGTTGAATTGGGGTTGAGATTGTTGGGAGGGAAGAGAGTTTGGGAGAGTGTGAAGTGTGTGGGAAATGAGGATTGTGTTTGTTTGTACAGAGATCTTGGATCTGGAATGGTGGTTTGCAGAAGGGTTGGGGATATGGATGAATGGGAATGGGTTTATGGGTGTGATTATCTAAAGGGGAAACAATTGCCCAATTCTCCCATTAGAGGGGCACTTCTTCATCCAACTCTTTCATCTTTCAAACAACACTAG 1101 0.5041 MSMWSNLPFDLLAKIFSFLSPDSLATARSACKNWHTCSKAYPLSPPTTTSSWFLALPIRNHRASCYARNPTIDKWHQLSLPLPSIRPIASIGSLLLLRVTNSTILQLGLCNPFTGEFKHLPRLHAARTKPAVGVTVSDSSHDDVLFPPFRVYVAGGMSEAAQGGATYETKVEMYDSRVDTWRIVGSTPMELAVRLTVWTPNENVCIGETLYWVTSARAYSVMGYDVGRNGWRELGVPMAEKLEFACLVKRNGALGLVGGTCGGGGGCIWGLSEGEKWCLVDKVPVELGLRLLGGKRVWESVKCVGNEDCVCLYRDLGSGMVVCRRVGDMDEWEWVYGCDYLKGKQLPNSPIRGALLHPTLSSFKQH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00143 366 ProSiteProfiles F-box domain profile. 1 36 IPR001810 GO:0005515
Phco1g00143 366 Gene3D - 4 42 - -
Phco1g00143 366 Gene3D - 48 304 IPR015915 GO:0005515
Phco1g00143 366 PANTHER BNACNNG10540D PROTEIN 2 339 - -
Phco1g00143 366 CDD F-box_SF 5 39 - -
Phco1g00143 366 Pfam F-box domain 4 39 IPR001810 GO:0005515
Phco1g00143 366 SMART fbox_2 7 47 IPR001810 GO:0005515
Phco1g00143 366 SUPERFAMILY F-box domain 1 56 IPR036047 GO:0005515
Phco1g00143 366 Pfam Kelch motif 150 186 IPR006652 GO:0005515
Phco1g00143 366 SUPERFAMILY Kelch motif 62 263 IPR015915 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00143 1 1021150 1022250 Phco1g00143 1 1021150 1022250 ECH