Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00141 ATGGAGGCCCTGCACTTGCACCGCGTGCTTCCCATGCCTGTTCCCCAAAATTCCGTCTTTTGGCGCGCAACTGCAACCCCATTATCCGCAGTTCCCATTGCAAGGCCACCATTGCGTTGGAAATCAGCATCCTCCCAAACTTGCACTGCCAGAGCAGGGTGGTTTTTGGGTCTTGGAGCAGATACCAAGAAGACAAATTTACCTGACACTGTCAAAGCCGGTGACCCTGTTCTGCACGAGCCCGCTCGGGAAGTTGATCCCAATGAGATAAATTCGGAGAAAGTGCAGAATATCATTGATAACATGATTCGGGTCATGAGGAATGCTCCGGGAGTCGGTCTAGCTGCTCCCCAGATTGGAATTCCTTTCAGGATAATTGTTTTGGAAGATACCAAAGAGTATATTAGTTATGTCCCGAAGGAAGAGTCTAAAGTTCAAGATAGAAGGCCTTTTGATCTTTTGGTCATCCTGAATCCCAAGCTAGAAAAGAAGAGCAAGAAGACTGCTCTATTTTTTGAAGGGTGCTTGAGTGTTGATGGGTTTAGAGCATTGGTGGAAAGATCCCTTGACGTTGAGGTTACAGGTTTGGATCGCTATGGTGCGCCAATCAAAATAAACGCTTCTGGGTGGCAGGCCAGAATTTTACAACATGAGTGTGATCACTTGGACGGAACTCTGTATGTTGATAAGATGGTACCTAGAACTTTCAGAACTGTGGACAACATGGACCTGCCTCTTGCCCAGGGATGCCCTAAACTTGGTCCTCGTTAA 771 0.4721 MEALHLHRVLPMPVPQNSVFWRATATPLSAVPIARPPLRWKSASSQTCTARAGWFLGLGADTKKTNLPDTVKAGDPVLHEPAREVDPNEINSEKVQNIIDNMIRVMRNAPGVGLAAPQIGIPFRIIVLEDTKEYISYVPKEESKVQDRRPFDLLVILNPKLEKKSKKTALFFEGCLSVDGFRALVERSLDVEVTGLDRYGAPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRTVDNMDLPLAQGCPKLGPR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00141 256 SUPERFAMILY Peptide deformylase 71 238 IPR036821 -
Phco1g00141 256 PRINTS Peptide deformylase signature 100 129 IPR023635 GO:0042586
Phco1g00141 256 PRINTS Peptide deformylase signature 204 233 IPR023635 GO:0042586
Phco1g00141 256 PRINTS Peptide deformylase signature 173 184 IPR023635 GO:0042586
Phco1g00141 256 PRINTS Peptide deformylase signature 185 203 IPR023635 GO:0042586
Phco1g00141 256 Hamap Peptide deformylase [def]. 66 242 IPR023635 GO:0042586
Phco1g00141 256 Gene3D Peptide deformylase 66 255 IPR036821 -
Phco1g00141 256 Pfam Polypeptide deformylase 71 234 IPR023635 GO:0042586
Phco1g00141 256 NCBIfam peptide deformylase 71 233 IPR023635 GO:0042586
Phco1g00141 256 CDD Pep_deformylase 71 227 IPR023635 GO:0042586
Phco1g00141 256 FunFam Peptide deformylase 67 250 - -
Phco1g00141 256 PANTHER PEPTIDE DEFORMYLASE 62 249 IPR023635 GO:0042586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00141 1 1010297 1012783 Phco1g00141 1 1010297 1012783 ECH