Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00138 ATGGAAGCAATCACGGAGGGAGTGAACAGCATCAACATCACTGAAGCGTACAAGAAGAATCGCATTCAGGTCTCCAATACCAAAAAGCCCCTCTTCTTTTACGTTAATCTTGCCAAGAGGTACATGCAACAGCATAATGAGGTCGAGCTCTCAGCACTGGGAATGGCTATTGCTACAGTGGTTACTGTTGCTGAAATCTTGAAAAACAATGGGCTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGACATTAAAGATGATTCTAGAGGAAGACCTGTCCAGAAGGCCAAGATTGAAATATTACTGGGGAAGACTGCAAACTTCGATGAGTTGATGGCTGCTGCGGCTGCTGAAGATGGTGAAAATGGAGAAGCTGAAGAGCACACTGCTTAA 396 0.4369 MEAITEGVNSINITEAYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAEDGENGEAEEHTA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00138 131 FunFam Uncharacterized protein At2g34160 18 130 - -
Phco1g00138 131 Coils Coil 126 131 - -
Phco1g00138 131 Gene3D - 18 129 IPR036882 GO:0003676
Phco1g00138 131 Pfam Alba 20 75 IPR002775 GO:0003676
Phco1g00138 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Phco1g00138 131 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
Phco1g00138 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 122 IPR014560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00138 Phco-Chr1 993408 995376 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00138 1 993408 995376 Phco1g00138 1 993408 995376 ECH
Phco10g01985 10 41706209 41708209 Phco1g00138 1 993408 995376 PCT