Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00130 ATGGCTTTGGCACGTTTAGCTTTGAAAGATTTGCGACAAAGGTTGTTTGCTTCATCTTCCTTAACTGGCCATGGTTCTGGTGGTGTGCACAGGCAGAGGTGGAACAATGAATTGCTCAAAAGGTTTGCCACTGCAGCAGGGGATAAAGGGAAATCTGAAGCCTCTGAAGTTGCTGTCACAGAAGGCAAAAAGTCTAATAGGTTGTTCCCCAGGAGGAGGGGCAGAAGATGGATTTGGAGAAACCATGATCGTGATTTCCCTCCTGCTCTCTATGAGTTCTTTCCTTCAGGGCTTGGGAATGCACTCATGCAGGCAAGTGAGAACATCAACAGGGTGCTTGAGAACATGAATCTGACACCTTGGTCTCTGAGTGGGCGTGTGAAAGAGAGAGATGATCATTACAAGCTGAGGTATGAGATGCCAGGAATGGCAAAAGAGGAGGTGAAGATCACCATTGATGATGGGATGTTAACAATAAAGGGAGAGCACAAGGAAGAGAAAGAAGAAGGGGAGGATGATGAGTATTGGTCATCAAGCAGCTATGGATACTATAACACAAGCCTGGTTTTGCCTGATGATGCCAAAGCTGATGACATTAAGGCAGAGTTGAAGGATGGTGTCTTAACTGTTACCATTCCTAGGACTAAGAACCCCAAAAAGGATGTGAAACAAGTCACAATAGAATGA 687 0.4527 MALARLALKDLRQRLFASSSLTGHGSGGVHRQRWNNELLKRFATAAGDKGKSEASEVAVTEGKKSNRLFPRRRGRRWIWRNHDRDFPPALYEFFPSGLGNALMQASENINRVLENMNLTPWSLSGRVKERDDHYKLRYEMPGMAKEEVKITIDDGMLTIKGEHKEEKEEGEDDEYWSSSSYGYYNTSLVLPDDAKADDIKAELKDGVLTVTIPRTKNPKKDVKQVTIE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00130 228 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 226 IPR044587 GO:0009408
Phco1g00130 228 CDD ACD_sHsps-like 127 214 - -
Phco1g00130 228 Pfam Hsp20/alpha crystallin family 127 227 IPR002068 -
Phco1g00130 228 Gene3D - 84 228 IPR008978 -
Phco1g00130 228 FunFam 26.5 kDa heat shock protein, mitochondrial 91 227 - -
Phco1g00130 228 SUPERFAMILY HSP20-like chaperones 116 227 IPR008978 -
Phco1g00130 228 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 228 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00130 Phco-Chr1 938951 940032 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00130 1 938951 940032 Phco1g00130 1 938951 940032 ECH