Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00125 ATGGAGAGCGAACCGCAGAGTGCAGGCAAAGATGAGGTTTTATCAGTTGAGCTTTCAGCTCCTTCTGCTTGGAAGAAACTGTTCTTCCCTAAGAAAGTAGGAACACCAAGGAAAAGTGAGATTTTATTCATAGCTCCTACTGGGGAAGAGATCACTTCCAAAAAGCAGTTGGAGCAGTACCTAAAGGCACATCCTGGGAATCCTGCCATCTCTGAGTTTGACTGGGGAACTGGTGAGACCCCTAGGCGATCAGCAAGGATTAGCGAGAAGGTGAAGTCGAGCCCAACAACAGAGACTGAGCCTCCAAGGAAAAGATCCCGAAAATCATCAGGTTCACGGAAGGATAACAAAGAAAACGAACCCGCAGCTGAAGAATCCAAACCAGATCCGGATGGAACTGATAACAACAATCAAGAAAAGACTGATACAGAGAAGATTAATAACAGTAATGCTGAAGTGCAAAATGCGACAGCTGAAAAGCCTGAGGGAGGAGAAGAACCATTGTTGGCAGAGTCAGAGGAGACATTTGCAGGGGAAGCTTTGAATACTGAGGAGATCACTGAAAAACACCAAGAGAATGAGGTCGTTGAAAAACCCAAAGAGGAGGAGGAGGTCACTGAAAAGCCTCAAGAGCAGGAGGTCATTGAAAAACCCCAAGAGGAGGAGGAGGCACGAATTGCATCAGGGAAAGAAAATGGGACAGTGGATGACAGTAAGCAAGACATAGAAGAAGATAATGTGATTCCTGATGCAAATGGAGGAGCTGAGAAAGTGAACCTGAACCCAGATGTTGAGGAGACGAACAATACCAGAGAAATCCCAGTAAGTGACGGAAAAAACAGCATTCAAGCAGAGGAGCAAGTAAATAAAATGGTTGACAACGGACAAGTTATTTGGAGCTGTGCTCAGTGA 912 0.4539 MESEPQSAGKDEVLSVELSAPSAWKKLFFPKKVGTPRKSEILFIAPTGEEITSKKQLEQYLKAHPGNPAISEFDWGTGETPRRSARISEKVKSSPTTETEPPRKRSRKSSGSRKDNKENEPAAEESKPDPDGTDNNNQEKTDTEKINNSNAEVQNATAEKPEGGEEPLLAESEETFAGEALNTEEITEKHQENEVVEKPKEEEEVTEKPQEQEVIEKPQEEEEARIASGKENGTVDDSKQDIEEDNVIPDANGGAEKVNLNPDVEETNNTREIPVSDGKNSIQAEEQVNKMVDNGQVIWSCAQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00125 303 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Phco1g00125 303 MobiDBLite consensus disorder prediction 142 156 - -
Phco1g00125 303 MobiDBLite consensus disorder prediction 96 141 - -
Phco1g00125 303 Pfam Methyl-CpG binding domain 18 79 IPR001739 GO:0003677
Phco1g00125 303 Gene3D - 2 163 - -
Phco1g00125 303 MobiDBLite consensus disorder prediction 62 281 - -
Phco1g00125 303 MobiDBLite consensus disorder prediction 262 281 - -
Phco1g00125 303 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 285 IPR039622 -
Phco1g00125 303 SUPERFAMILY DNA-binding domain 9 105 IPR016177 GO:0003677
Phco1g00125 303 MobiDBLite consensus disorder prediction 183 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00125 Phco-Chr1 917141 919743 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00125 1 917141 919743 Phco1g00125 1 917141 919743 ECH